Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Ribosomal protein S2, conserved site

Term: IPR018130  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene46 biogeco3 v1.0 150
AutoFact: Putative 40S Ribosomal protein [Oryza sativa Japonica Group] gb|ABF94325.1| 40S ribosomal protein SA, putative, expressed [Oryza sativa Japonica Group] gb|EAZ25828.1| hypothetical protein OsJ_09668 [Oryza sativa Japonica Group] gb|ACJ54906.1| 40S ribosoma 0.0
Blast2go: 40s ribosomal protein sa 0.0
unknown
biog3_v1.0_unigene297 biogeco3 v1.0 955
AutoFact: Putative aldose 1-epimerase - like protein [Oryza sativa Japonica Group] gb|AAM46059.1|AC122145_13 Putative aldose 1-epimerase - like protein [Oryza sativa Japonica Group] gb|EAZ15347.1| hypothetical protein OsJ_30764 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aldose 1-epimerase family expressed 0.0
C-terminus
biog3_v1.0_unigene335 biogeco3 v1.0 521
AutoFact: Oligopeptide transporter OPT family n=2 Tax=Populus trichocarpa RepID=B9HN76_POPTR 0.0
FL-Next: sp=Oligopeptide transporter 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: isp4-like protein 0.0
Internal
biog3_v1.0_unigene387 biogeco3 v1.0 563
AutoFact: glucan endo-1,3-beta-glucosidase 13 [Arabidopsis thaliana] sp|Q9FJU9.1|E1313_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 13; AltName: Full=(1->3)-beta-glucan endohydrolase 13; Short=(1->3)-beta-glucanase 13; AltName: Full=Beta-1,3-endoglucanase 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Putative Complete
biog3_v1.0_unigene733 biogeco3 v1.0 862
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB79689.1| putative protein [Arabidopsis thaliana] gb|AAM13213.1| unknown protein [Arabidopsis thaliana] gb|AAO30065.1| unknown protein [Arabidopsis thaliana] gb|AEE85617.1| uncharacterized protein [Arab 1.99993e-41
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: uncharacterized protein loc100775992 isoform 1 0.0
Internal
biog3_v1.0_unigene1290 biogeco3 v1.0 751
AutoFact: Glycoside hydrolase, family 17; Virulence factor, pectin lyase fold; X8 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Putative C-terminus
biog3_v1.0_unigene1858 biogeco3 v1.0 233
AutoFact: DUF1624 multi-domain protein 4.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heparan-alpha-glucosaminide n-acetyltransferase-like 0.0
C-terminus
biog3_v1.0_unigene2044 biogeco3 v1.0 685
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein at1g76660-like 0.0
Putative N-terminus
biog3_v1.0_unigene2329 biogeco3 v1.0 667
AutoFact: tryptophan aminotransferase related 2 [Arabidopsis thaliana] ref|NP_974608.1| tryptophan aminotransferase related 2 [Arabidopsis thaliana] gb|AAK92714.1| putative alliin lyase [Arabidopsis thaliana] gb|AAM14394.1| putative alliin lyase [Arabidopsis thalia 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: alliin lyase 0.0
Internal
biog3_v1.0_unigene2339 biogeco3 v1.0 327
AutoFact: Multidrug resistance protein ABC transporter family n=1 Tax=Populus trichocarpa RepID=B9IB53_POPTR 4.0e-35
FL-Next: sp=Putative ABC transporter C family member 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter c family member 9-like 7.26573e-41
Internal
biog3_v1.0_unigene2996 biogeco3 v1.0 459
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: heparan-alpha-glucosaminide n-acetyltransferase-like 0.0
C-terminus
biog3_v1.0_unigene3123 biogeco3 v1.0 570
AutoFact: cereblon [Arabidopsis thaliana] gb|AAX12874.1| At2g25740 [Arabidopsis thaliana] gb|AEC07747.1| cereblon [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene3155 biogeco3 v1.0 247
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9RIU7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: detoxifying efflux carrier 35 0.0
C-terminus
biog3_v1.0_unigene3241 biogeco3 v1.0 1299
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9GP57_POPTR 0.0
FL-Next: tr=Cationic amino acid transporter; subsp. trichocarpa). 0.0
Blast2go: uncharacterized amino acid permease -like 0.0
C-terminus
biog3_v1.0_unigene3350 biogeco3 v1.0 450
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SED3_RICCO 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tryptophan aminotransferase-related protein 4-like 0.0
Internal
biog3_v1.0_unigene3369 biogeco3 v1.0 503
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9GP57_POPTR 0.0
FL-Next: tr=Cationic amino acid transporter, putative; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized amino acid permease -like 0.0
Internal
biog3_v1.0_unigene3581 biogeco3 v1.0 360
AutoFact: O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] gb|AAF02143.1|AC009853_3 putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] dbj|BAC42699.1| putative beta-1,3-glucanase precursor [Arabidopsis thaliana] gb|AAO64098.1| putative g 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: o-glycosyl hydrolases family 17 protein 0.0
N-terminus
biog3_v1.0_unigene4168 biogeco3 v1.0 373
AutoFact: DUF1624 multi-domain protein 4.0e-10
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: heparan-alpha-glucosaminide n-acetyltransferase-like 0.0
Internal
biog3_v1.0_unigene4272 biogeco3 v1.0 553
AutoFact: Sulfate transporter, putative n=1 Tax=Ricinus communis RepID=B9SQC2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sulfate transporter 0.0
Internal
biog3_v1.0_unigene4308 biogeco3 v1.0 1142
AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAD20090.1| putative endosomal protein [Arabidopsis thaliana] gb|AAL24256.1| At2g01970/F14H20.4 [Arabidopsis thaliana] dbj|BAE98629.1| putative endosomal protein [Arabidopsis thaliana] gb|AEC05528 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane 9 superfamily protein member 1 precursor 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain