Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene4966 biogeco3 v1.0 436
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Internal
biog3_v1.0_unigene5001 biogeco3 v1.0 345
AutoFact: Callose synthase n=1 Tax=Arabidopsis thaliana RepID=F4JDA3_ARATH 0.0
FL-Next: sp=Callose synthase 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 10 0.0
Internal
biog3_v1.0_unigene5005 biogeco3 v1.0 243
AutoFact: FPL domain containing protein 7.0e-26
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene5011 biogeco3 v1.0 486
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTL0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: calmodulin binding 0.0
N-terminus
biog3_v1.0_unigene5057 biogeco3 v1.0 511
AutoFact: Transitional endoplasmic reticulum ATPase-like n=3 Tax=Oryza sativa RepID=Q6YUV9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: p-loop containing ntpase domain-containing protein 0.0
Internal
biog3_v1.0_unigene5242 biogeco3 v1.0 291
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene5341 biogeco3 v1.0 475
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 0.0
Internal
biog3_v1.0_unigene5442 biogeco3 v1.0 408
AutoFact: CTR1-like protein kinase n=1 Tax=Rosa hybrid cultivar RepID=Q93XL9_ROSHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctr1-like protein kinase 0.0
C-terminus
biog3_v1.0_unigene5445 biogeco3 v1.0 277
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 0.0
Internal
biog3_v1.0_unigene5474 biogeco3 v1.0 190
AutoFact: Cytochrome c oxidase subunit 2 (Fragment) n=2 Tax=Magnoliophyta RepID=B5LYM7_ESCCA 2.0e-09
Blast2go: cytochrome c oxidase subunit 2 8.20941e-13
unknown
biog3_v1.0_unigene5543 biogeco3 v1.0 679
AutoFact: Transitional endoplasmic reticulum ATPase-like n=3 Tax=Oryza sativa RepID=Q6YUV9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing ntpase domain-containing protein 0.0
Internal
biog3_v1.0_unigene5606 biogeco3 v1.0 356
AutoFact: F-box protein At-B [Arabidopsis thaliana] sp|Q9ZWC6.1|ATB_ARATH RecName: Full=F-box protein At-B gb|AAF79512.1|AC002328_20 F20N2.2 [Arabidopsis thaliana] gb|AAM26672.1| At1g55590/F20N2_18 [Arabidopsis thaliana] gb|AAN46816.1| At1g55590/F20N2_18 [Arabidops 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at-b-like 0.0
Internal
biog3_v1.0_unigene5683 biogeco3 v1.0 372
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: sp=FACT complex subunit SPT16; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: fact complex subunit 0.0
Internal
biog3_v1.0_unigene5766 biogeco3 v1.0 730
AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJ06_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: iq domain-containing protein 0.0
Internal
biog3_v1.0_unigene5803 biogeco3 v1.0 347
AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4HS99_ARATH 5.0e-25
FL-Next: tr=Tetratricopeptide repeat-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: tetratricopeptide repeat-containing protein 4.33558e-30
Internal
biog3_v1.0_unigene5806 biogeco3 v1.0 741
AutoFact: protein trichome berefringence-like 7 [Arabidopsis thaliana] gb|AEE32362.1| protein trichome berefringence-like 7 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein trichome berefringence-like 7 0.0
Internal
biog3_v1.0_unigene5865 biogeco3 v1.0 1977
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RT51_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-arginine methyltransferase carm1 0.0
Complete
biog3_v1.0_unigene5877 biogeco3 v1.0 1241
AutoFact: AAA-type ATPase family protein [Arabidopsis thaliana] dbj|BAF01763.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82177.1| AAA-type ATPase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog3_v1.0_unigene5969 biogeco3 v1.0 1305
AutoFact: gamma-secretase subunit APH1-like protein [Arabidopsis thaliana] sp|Q8L9G7.2|APH1_ARATH RecName: Full=Gamma-secretase subunit APH1-like gb|AAL36063.1| At2g31440/T28P16.7 [Arabidopsis thaliana] gb|AAD26475.2| unknown protein [Arabidopsis thaliana] gb|AAM19 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gamma-secretase subunit aph-1b 0.0
Complete
biog3_v1.0_unigene5997 biogeco3 v1.0 720
AutoFact: Serine-type endopeptidase n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD4_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: prolyl oligopeptidase-like protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain