Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene3528 biogeco3 v1.0 478
AutoFact: Amino acid transport protein AAT1 n=3 Tax=Arabidopsis RepID=Q84MA5_ARATH 0.0
FL-Next: tr=Amino acid transport protein AAT1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cationic amino acid 0.0
Internal
biog3_v1.0_unigene3532 biogeco3 v1.0 416
AutoFact: HECT; Ubiquitin [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
C-terminus
biog3_v1.0_unigene3715 biogeco3 v1.0 262
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] dbj|BAB02363.1| unnamed protein product [Arabidopsis thaliana] gb|AAU05531.1| At3g21690 [Arabidopsis thaliana] gb|AEE76538.1| mate efflux domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 0.0
Internal
biog3_v1.0_unigene3725 biogeco3 v1.0 875
AutoFact: DUF620 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative N-terminus
biog3_v1.0_unigene3779 biogeco3 v1.0 230
AutoFact: chloride channel protein CLC-f [Arabidopsis thaliana] sp|Q8RXR2.2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana] emb|CAC36386.1| hypothetical protein [A 0.0
Blast2go: chloride channel protein clc-f-like 0.0
unknown
biog3_v1.0_unigene3791 biogeco3 v1.0 357
AutoFact: UDP-glucose:glycoprotein glucosyltransferase n=3 Tax=Arabidopsis RepID=F4I8G1_ARATH 0.0
FL-Next: sp=UDP-glucose:glycoprotein glucosyltransferase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: udp-glucose:glycoprotein glucosyltransferase 0.0
Internal
biog3_v1.0_unigene3941 biogeco3 v1.0 315
AutoFact: protein trichome birefringence-like 6 [Arabidopsis thaliana] emb|CAB82953.1| putative protein [Arabidopsis thaliana] gb|AAM61621.1| unknown [Arabidopsis thaliana] dbj|BAF00927.1| hypothetical protein [Arabidopsis thaliana] gb|AEE80346.1| protein trichome 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene3981 biogeco3 v1.0 429
AutoFact: Stachyose synthase, putative n=1 Tax=Ricinus communis RepID=B9SXA4_RICCO 0.0
FL-Next: Isoform 3 of Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 0.0
Blast2go: alkaline alpha galactosidase i 0.0
N-terminus
biog3_v1.0_unigene4015 biogeco3 v1.0 259
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9S058_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamoyl- reductase 0.0
N-terminus
biog3_v1.0_unigene4036 biogeco3 v1.0 354
AutoFact: pfkB-type carbohydrate kinase-like protein [Arabidopsis thaliana] gb|AAK32830.1|AF361817_1 At1g06730/F4H5_22 [Arabidopsis thaliana] gb|AEE28029.1| pfkB-type carbohydrate kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Ribokinase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: pfkb-type carbohydrate kinase family protein 0.0
Internal
biog3_v1.0_unigene4076 biogeco3 v1.0 193
AutoFact: [O] COG0464 ATPases of the AAA+ class 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene4117 biogeco3 v1.0 386
AutoFact: oxidoreductase [Arabidopsis thaliana] ref|NP_001078177.1| oxidoreductase [Arabidopsis thaliana] gb|AAK62416.1|AF386971_1 Unknown protein [Arabidopsis thaliana] dbj|BAB02034.1| unnamed protein product [Arabidopsis thaliana] gb|AAP37844.1| At3g18210 [Arabid 0.0
FL-Next: sp=Uncharacterized PKHD-type hydroxylase At1g22950; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized pkhd-type hydroxylase at1g22950-like 0.0
Internal
biog3_v1.0_unigene4131 biogeco3 v1.0 1097
AutoFact: Trehalose 6-phosphate synthase n=3 Tax=Solanaceae RepID=D4QAK4_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trehalose-phosphate synthase 0.0
Putative Complete
biog3_v1.0_unigene4156 biogeco3 v1.0 246
AutoFact: protein trichome birefringence-like 5 [Arabidopsis thaliana] gb|AED92864.1| protein trichome birefringence-like 5 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein trichome birefringence-like 5 0.0
Internal
biog3_v1.0_unigene4233 biogeco3 v1.0 425
AutoFact: CTR1-like protein kinase n=1 Tax=Rosa hybrid cultivar RepID=Q93XL9_ROSHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctr1-like protein kinase 0.0
Putative N-terminus
biog3_v1.0_unigene4247 biogeco3 v1.0 500
AutoFact: 1,3-beta-glucan synthase, putative n=1 Tax=Ricinus communis RepID=B9SQ54_RICCO 0.0
FL-Next: sp=Callose synthase 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: callose synthase 0.0
Internal
biog3_v1.0_unigene4315 biogeco3 v1.0 1124
AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene4328 biogeco3 v1.0 258
AutoFact: DUF620 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4349 biogeco3 v1.0 328
AutoFact: CTR1-like protein kinase [Solanum lycopersicum] gb|AAR89823.1| CTR1-like protein kinase [Solanum lycopersicum] 0.0
FL-Next: sp=Serine/threonine-protein kinase CTR1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ctr1-like protein kinase 0.0
Internal
biog3_v1.0_unigene4369 biogeco3 v1.0 229
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain