Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2213 biogeco3 v1.0 453
AutoFact: putative casein kinase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: casein kinase 0.0
Putative C-terminus
biog3_v1.0_unigene2228 biogeco3 v1.0 509
AutoFact: vacuolar protein sorting 13C protein-like [Oryza sativa Japonica Group] dbj|BAD19586.1| vacuolar protein sorting 13C protein-like [Oryza sativa Japonica Group] 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pleckstrin homology domain-containing protein 0.0
Internal
biog3_v1.0_unigene2324 biogeco3 v1.0 812
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene2452 biogeco3 v1.0 612
AutoFact: pfam12807, eIF3_p135, Translation initiation factor eIF3 subunit 135 6.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein kiaa0664 homolog 0.0
Internal
biog3_v1.0_unigene2468 biogeco3 v1.0 297
AutoFact: Intron maturase, type II family protein n=2 Tax=Arabidopsis thaliana RepID=Q9FJR9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized mitochondrial protein ymf11-like 0.0
Internal
biog3_v1.0_unigene2509 biogeco3 v1.0 664
AutoFact: FAD/NAD(P)-binding oxidoreductase domain-containing protein [Arabidopsis thaliana] gb|AAF04895.1|AC011437_10 unknown protein [Arabidopsis thaliana] gb|AAK91359.1| AT3g04650/F7O18_13 [Arabidopsis thaliana] gb|AAO42761.1| At3g04650/F7O18_13 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: fad nad -binding oxidoreductase domain-containing protein 0.0
Putative N-terminus
biog3_v1.0_unigene2518 biogeco3 v1.0 628
AutoFact: octicosapeptide/Phox/Bem1p domain-containing protein kinase [Arabidopsis thaliana] emb|CAB51173.1| putative protein [Arabidopsis thaliana] gb|AEE78220.1| octicosapeptide/Phox/Bem1p domain-containing protein kinase [Arabidopsis thaliana] 6.0e-35
Blast2go: serine threonine protein 2.8026e-44
Coding
biog3_v1.0_unigene2520 biogeco3 v1.0 495
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SIX2_RICCO 0.0
FL-Next: sp=Auxin transport protein BIG; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
Internal
biog3_v1.0_unigene2607 biogeco3 v1.0 820
AutoFact: Lipid binding protein, putative n=1 Tax=Ricinus communis RepID=B9S1J0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: enhanced disease resistance 2 protein 0.0
Putative C-terminus
biog3_v1.0_unigene2738 biogeco3 v1.0 307
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene2747 biogeco3 v1.0 473
AutoFact: Cinnamoyl-CoA reductase, putative n=1 Tax=Ricinus communis RepID=B9S058_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cinnamoyl- reductase 0.0
Internal
biog3_v1.0_unigene2883 biogeco3 v1.0 327
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein spa1-related 3-like 0.0
Internal
biog3_v1.0_unigene3023 biogeco3 v1.0 608
AutoFact: WS02760.CR_M13 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS02760_M13 3', mRNA sequence. 0.0
FL-Next: tr=Eukaryotic translation initiation factor 3 subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein kiaa0664 homolog 0.0
Internal
biog3_v1.0_unigene3047 biogeco3 v1.0 802
AutoFact: Probable L-type lectin-domain containing receptor kinase S.5 n=2 Tax=Arabidopsis RepID=LRKS5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable l-type lectin-domain containing receptor kinase -like 0.0
Internal
biog3_v1.0_unigene3104 biogeco3 v1.0 445
AutoFact: DUF620 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene3155 biogeco3 v1.0 247
AutoFact: Multidrug resistance pump, putative n=1 Tax=Ricinus communis RepID=B9RIU7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: detoxifying efflux carrier 35 0.0
C-terminus
biog3_v1.0_unigene3337 biogeco3 v1.0 578
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
FL-Next: tr=Brca1-associated protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: brca1-associated protein 0.0
Putative C-terminus
biog3_v1.0_unigene3366 biogeco3 v1.0 413
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: Isoform 2 of 5'-3' exoribonuclease 3 OS=Arabidopsis thaliana GN=XRN3 0.0
Internal
biog3_v1.0_unigene3417 biogeco3 v1.0 289
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gamma-irradiation and mitomycin c induced 1 0.0
Internal
biog3_v1.0_unigene3440 biogeco3 v1.0 427
AutoFact: Myosin_tail_1 multi-domain protein 7.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein loc100252352 4.2039e-45
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain