Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Reverse transcriptase

Term: IPR000477  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene24952 biogeco3 v1.0 358
AutoFact: Unassigned protein
FL-Next: sp=Auxin transport protein BIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase ubr4 0.0
Internal
biog3_v1.0_unigene25017 biogeco3 v1.0 351
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 7.0e-21
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 1.55313e-21
Putative C-terminus
biog3_v1.0_unigene25069 biogeco3 v1.0 391
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene25159 biogeco3 v1.0 284
AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
Blast2go: at1g14850-like protein 0.0
unknown
biog3_v1.0_unigene25221 biogeco3 v1.0 284
AutoFact: lectin-like receptor kinase 7;1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
biog3_v1.0_unigene25238 biogeco3 v1.0 317
AutoFact: EVE domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thymocyte nuclear protein 1-like 0.0
N-terminus
biog3_v1.0_unigene25370 biogeco3 v1.0 291
AutoFact: guanine nucleotide-exchange-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: brefeldin a-inhibited guanine nucleotide-exchange protein 1-like 0.0
Putative C-terminus
biog3_v1.0_unigene25371 biogeco3 v1.0 143
AutoFact: FPL domain containing protein 7.0e-26
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene25376 biogeco3 v1.0 321
AutoFact: WS02925.CR_M21 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS02925_M21 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna-binding protein chloroplast 0.0
Internal
biog3_v1.0_unigene25446 biogeco3 v1.0 173
AutoFact: Stachyose synthase, putative n=1 Tax=Ricinus communis RepID=B9SXA4_RICCO 0.0
Blast2go: alkaline alpha galactosidase i 0.0
unknown
biog3_v1.0_unigene25506 biogeco3 v1.0 161
AutoFact: Probable L-type lectin-domain containing receptor kinase S.5 n=2 Tax=Arabidopsis RepID=LRKS5_ARATH 0.0
Blast2go: probable l-type lectin-domain containing receptor kinase -like 0.0
unknown
biog3_v1.0_unigene25611 biogeco3 v1.0 444
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAL25560.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AAM26660.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AEE27488.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamin pyrophosphokinase1 0.0
Internal
biog3_v1.0_unigene25696 biogeco3 v1.0 409
AutoFact: HAT family dimerization domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4KHA1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hat family dimerization domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene25847 biogeco3 v1.0 415
AutoFact: translation initiation factor eIF-2B epsilon subunit [Arabidopsis thaliana] gb|AAC12836.1| putative translation initiation factor eIF-2B epsilon subunit [Arabidopsis thaliana] gb|AAM98194.1| putative translation initiation factor eIF-2B epsilon subunit [A 0.0
FL-Next: tr=eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: translation initiation factor eif-2b epsilon subunit 0.0
Internal
biog3_v1.0_unigene25994 biogeco3 v1.0 284
AutoFact: WS0336.C21_F15 WS-SE-N-A-18 Picea glauca cDNA clone WS0336_F15 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene25997 biogeco3 v1.0 300
AutoFact: CTR1-like protein kinase [Solanum lycopersicum] gb|AAR89823.1| CTR1-like protein kinase [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctr1-like protein kinase 0.0
Internal
biog3_v1.0_unigene26052 biogeco3 v1.0 476
AutoFact: putative methyltransferase PMT6 [Arabidopsis thaliana] sp|Q84TJ0.1|PMT6_ARATH RecName: Full=Probable methyltransferase PMT6 gb|AAO64151.1| unknown protein [Arabidopsis thaliana] dbj|BAF00512.1| hypothetical protein [Arabidopsis thaliana] gb|AEE74871.1| pu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt7-like 0.0
C-terminus
biog3_v1.0_unigene26061 biogeco3 v1.0 123
AutoFact: Cytochrome c oxidase subunit 2 (Fragment) n=2 Tax=Magnoliophyta RepID=B5LYM7_ESCCA 2.0e-09
Blast2go: cytochrome c oxidase subunit 2 8.20941e-13
unknown
biog3_v1.0_unigene26165 biogeco3 v1.0 229
AutoFact: putative 5-3 exoribonuclease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 5 -3 exoribonuclease 3-like 0.0
Internal
biog3_v1.0_unigene26236 biogeco3 v1.0 279
AutoFact: [R] COG5415 Predicted integral membrane metal-binding protein 4.0e-05
FL-Next: sp=Uncharacterized protein At2g24330; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein at2g24330-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain