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Assembly Name: biogeco3 v1.0

Name: GPCR, rhodopsin-like, 7TM

Term: IPR000276  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene18827 biogeco3 v1.0 296
AutoFact: Zinc finger-homeodomain protein 2 n=1 Tax=Saruma henryi RepID=B0LK13_SARHE 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene19016 biogeco3 v1.0 352
AutoFact: component of IIS longevity pathway SMK-1 domain-containing protein [Arabidopsis thaliana] gb|AAM19788.1| At3g06670/T8E24.10 [Arabidopsis thaliana] gb|AAO23576.1| At3g06670/T8E24.10 [Arabidopsis thaliana] gb|AEE74437.1| component of IIS longevity pathway S 0.0
Blast2go: serine threonine-protein phosphatase 4 regulatory subunit 3-like 0.0
unknown
biog3_v1.0_unigene19383 biogeco3 v1.0 234
AutoFact: AFG1 family ATPase [Parvibaculum lavamentivorans DS-1] gb|ABS63068.1| AFG1-family ATPase [Parvibaculum lavamentivorans DS-1] 0.0
FL-Next: tr=Atpase n2b, putative; Ricinus communis (Castor bean). 0.0
Blast2go: afg1-like protein 0.0
Internal
biog3_v1.0_unigene19395 biogeco3 v1.0 247
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene19522 biogeco3 v1.0 245
AutoFact: peptide-O-fucosyltransferase [Arabidopsis thaliana] gb|AAO22598.1| unknown protein [Arabidopsis thaliana] gb|AEE29566.1| peptide-O-fucosyltransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gdp-fucose protein-o-fucosyltransferase 2 0.0
Internal
biog3_v1.0_unigene19526 biogeco3 v1.0 256
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene19776 biogeco3 v1.0 220
AutoFact: ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana] 1.0e-21
FL-Next: sp=Serine/threonine-protein kinase ATM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine-protein kinase atm 9.70344e-28
Internal
biog3_v1.0_unigene19783 biogeco3 v1.0 177
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
FL-Next: tr=U520, putative; Ricinus communis (Castor bean). 0.0
Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0
Internal
biog3_v1.0_unigene19802 biogeco3 v1.0 243
AutoFact: Pectinacetylesterase [Medicago truncatula] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin acetylesterase 2.67483e-13
Internal
biog3_v1.0_unigene19839 biogeco3 v1.0 191
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] emb|CAB40988.1| putative protein [Arabidopsis thaliana] emb|CAB78313.1| putative protein [Arabidopsis thaliana] dbj|BAF00854.1| hypothetical protein [Arabidopsis thaliana] gb|ABH 0.0
Blast2go: u-box domain-containing protein 4-like 0.0
unknown
biog3_v1.0_unigene19904 biogeco3 v1.0 172
AutoFact: Strictosidine synthase, putative n=1 Tax=Ricinus communis RepID=B9RJ21_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: strictosidine synthase family protein 0.0
Internal
biog3_v1.0_unigene19907 biogeco3 v1.0 324
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 8.7804e-41
Internal
biog3_v1.0_unigene19999 biogeco3 v1.0 158
AutoFact: lectin protein kinase-like protein [Arabidopsis thaliana] sp|Q9XID3.1|Y1343_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; Flags: Precursor gb|AAD39605.1|AC007454_4 Contains similarity to gi|479356 protein kin 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene20197 biogeco3 v1.0 435
AutoFact: Spotted leaf protein, putative n=1 Tax=Ricinus communis RepID=B9T5I0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein pub13 0.0
Internal
biog3_v1.0_unigene20263 biogeco3 v1.0 197
AutoFact: putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gb|AAK63859.1|AF389287_1 At1g05170/YUP8H12_22 [Arabidopsis thaliana] gb|AAB71461.1| Similar to Sequence 10 from patent 5477002 (gb|1253956) [Arabidopsis thaliana] gb|AAM47315.1| At1g05170/YU 0.0
Blast2go: galactosyltransferase family protein 0.0
unknown
biog3_v1.0_unigene20277 biogeco3 v1.0 420
AutoFact: lectin protein kinase-like protein [Arabidopsis thaliana] sp|Q9XID3.1|Y1343_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; Flags: Precursor gb|AAD39605.1|AC007454_4 Contains similarity to gi|479356 protein kin 0.0
FL-Next: sp=G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene20329 biogeco3 v1.0 165
AutoFact: Peroxidase-like protein (Fragment) n=19 Tax=Picea sitchensis RepID=E0Z6I6_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxidase-like protein 0.0
Internal
biog3_v1.0_unigene20481 biogeco3 v1.0 352
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein TRANSPARENT TESTA 12 0.0
Internal
biog3_v1.0_unigene20723 biogeco3 v1.0 308
AutoFact: Beta-galactosidase 6 n=3 Tax=Arabidopsis RepID=BGAL6_ARATH 3.0e-36
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-galactosidase 6 3.36172e-42
Internal
biog3_v1.0_unigene20746 biogeco3 v1.0 304
AutoFact: type-B response regulator [Catharanthus roseus] 0.0
Blast2go: type-b response regulator 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain