Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: GPCR, rhodopsin-like, 7TM

Term: IPR000276  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene6380 biogeco3 v1.0 601
AutoFact: Bile acid sodium symporter n=2 Tax=Zea mays RepID=B6TKE8_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bile acid:sodium symporter family protein 0.0
Internal
biog3_v1.0_unigene6426 biogeco3 v1.0 1205
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T8B4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable mitochondrial chaperone bcs1-b-like 0.0
N-terminus
biog3_v1.0_unigene6446 biogeco3 v1.0 421
AutoFact: Strictosidine synthase, putative n=1 Tax=Ricinus communis RepID=B9RJ21_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: strictosidine synthase family protein 0.0
Internal
biog3_v1.0_unigene6530 biogeco3 v1.0 978
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transparent testa 12 0.0
C-terminus
biog3_v1.0_unigene6623 biogeco3 v1.0 452
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RF24_RICCO 4.99997e-41
Blast2go: ring finger 8.7804e-41
Putative coding
biog3_v1.0_unigene6799 biogeco3 v1.0 894
AutoFact: mate efflux domain-containing protein [Arabidopsis thaliana] gb|AAK53040.1|AF375456_1 AT5g65380/MNA5_11 [Arabidopsis thaliana] dbj|BAB11560.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28899.1| At5g65380/MNA5_11 [Arabidopsis thaliana] gb|AED980 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
Internal
biog3_v1.0_unigene6876 biogeco3 v1.0 716
AutoFact: peroxidase 40 [Arabidopsis thaliana] dbj|BAD43424.1| unnamed protein product [Arabidopsis thaliana] dbj|BAD43745.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83724.1| peroxidase 40 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxidase 40 0.0
C-terminus
biog3_v1.0_unigene6886 biogeco3 v1.0 238
AutoFact: Pollen allergen CJP38 n=1 Tax=Cryptomeria japonica RepID=Q588B8_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta- -glucanase 0.0
C-terminus
biog3_v1.0_unigene6900 biogeco3 v1.0 339
AutoFact: Zinc finger-homeodomain protein 2 n=1 Tax=Saruma henryi RepID=B0LK13_SARHE 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene6990 biogeco3 v1.0 650
AutoFact: [T] COG2062 Phosphohistidine phosphatase SixA 3.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene7043 biogeco3 v1.0 411
AutoFact: DUF1336 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipid binding 0.0
Putative C-terminus
biog3_v1.0_unigene7137 biogeco3 v1.0 1042
AutoFact: Protein phosphatase 2c, putative n=1 Tax=Ricinus communis RepID=B9R7R1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable protein phosphatase 2c 55-like 0.0
Putative Complete
biog3_v1.0_unigene7228 biogeco3 v1.0 826
AutoFact: ATP-dependent Clp protease ATP-binding subunit precursor [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene7349 biogeco3 v1.0 839
AutoFact: MATE efflux family protein [Arabidopsis thaliana] gb|AAD46034.1|AC007519_19 F16N3.20 [Arabidopsis thaliana] gb|AEE32181.1| MATE efflux family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multidrug resistance 0.0
Putative C-terminus
biog3_v1.0_unigene7503 biogeco3 v1.0 585
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene7559 biogeco3 v1.0 409
AutoFact: peptide-O-fucosyltransferase [Arabidopsis thaliana] gb|AAO22598.1| unknown protein [Arabidopsis thaliana] gb|AEE29566.1| peptide-O-fucosyltransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=GDP-fucose protein-O-fucosyltransferase 2; Solanum tuberosum (Potato). 0.0
Blast2go: gdp-fucose protein-o-fucosyltransferase 2 0.0
C-terminus
biog3_v1.0_unigene7602 biogeco3 v1.0 303
AutoFact: Protein predicted to be involved in carbohydrate metabolism (ISS) [Ostreococcus tauri] emb|CAL57637.1| Protein predicted to be involved in carbohydrate metabolism (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene7724 biogeco3 v1.0 278
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Internal
biog3_v1.0_unigene7832 biogeco3 v1.0 446
AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
Blast2go: chaperone protein chloroplastic-like 0.0
Coding
biog3_v1.0_unigene7916 biogeco3 v1.0 316
AutoFact: putative beta-1,3-galactosyltransferase 6 [Arabidopsis thaliana] sp|Q9MAP8.1|B3GT6_ARATH RecName: Full=Probable beta-1,3-galactosyltransferase 6 gb|AAF31275.1|AC006424_4 Highly similar to avr9 [Arabidopsis thaliana] gb|AAP21243.1| At1g32930 [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycosyltransferase-like protein 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain