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Assembly Name: biogeco3 v1.0

Name: GPCR, rhodopsin-like, 7TM

Term: IPR000276  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene23364 biogeco3 v1.0 269
AutoFact: PREDICTED: similar to AO (L-ASPARTATE OXIDASE); L-aspartate oxidase n=1 Tax=Vitis vinifera RepID=UPI0001984C26 0.0
FL-Next: sp=Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: l-aspartate oxidase 0.0
Internal
biog3_v1.0_unigene23589 biogeco3 v1.0 517
AutoFact: Lipid binding protein n=2 Tax=Andropogoneae RepID=B4F841_MAIZE 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipid binding 0.0
C-terminus
biog3_v1.0_unigene23667 biogeco3 v1.0 245
AutoFact: Golgi transport complex-related protein [Arabidopsis thaliana] gb|AAG52007.1|AC012563_17 putative golgi transport complex protein; 67058-70172 [Arabidopsis thaliana] gb|AEE34723.1| Golgi transport complex-related protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23713 biogeco3 v1.0 330
AutoFact: Peroxidase 72, putative n=1 Tax=Ricinus communis RepID=B9S693_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxidase 72 0.0
Putative N-terminus
biog3_v1.0_unigene23718 biogeco3 v1.0 305
AutoFact: putative esterase [Oryza sativa Japonica Group] gb|EAY73022.1| hypothetical protein OsI_00894 [Oryza sativa Indica Group] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: esterase precursor 2.5669e-30
Internal
biog3_v1.0_unigene23728 biogeco3 v1.0 232
AutoFact: putative beta-1,3-galactosyltransferase 2 [Arabidopsis thaliana] gb|AAK63859.1|AF389287_1 At1g05170/YUP8H12_22 [Arabidopsis thaliana] gb|AAB71461.1| Similar to Sequence 10 from patent 5477002 (gb|1253956) [Arabidopsis thaliana] gb|AAM47315.1| At1g05170/YU 0.0
FL-Next: Isoform 2 of Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 0.0
Blast2go: galactosyltransferase family protein 0.0
Putative N-terminus
biog3_v1.0_unigene23881 biogeco3 v1.0 216
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit 0.0
Putative N-terminus
biog3_v1.0_unigene23974 biogeco3 v1.0 320
AutoFact: KAP multi-domain protein 6.0e-08
Blast2go: u-box domain-containing protein 4-like 0.0
unknown
biog3_v1.0_unigene24231 biogeco3 v1.0 314
AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase 0.0
Internal
biog3_v1.0_unigene24455 biogeco3 v1.0 314
AutoFact: SPA1-related 4 protein [Arabidopsis thaliana] ref|NP_849802.1| SPA1-related 4 protein [Arabidopsis thaliana] sp|Q94BM7.1|SPA4_ARATH RecName: Full=Protein SPA1-RELATED 4 gb|AAK64180.1| putative phytochrome A supressor spa1 protein [Arabidopsis thaliana] gb 4.2039e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein spa1-related 3-like 0.0
Internal
biog3_v1.0_unigene24526 biogeco3 v1.0 411
AutoFact: Ubiquitin-protein ligase, PUB13 n=2 Tax=Selaginella moellendorffii RepID=D8SNN8_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein pub13 0.0
N-terminus
biog3_v1.0_unigene24532 biogeco3 v1.0 374
AutoFact: Peroxidase n=4 Tax=Populus RepID=A9PD65_POPTR 2.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxidase 0.0
Internal
biog3_v1.0_unigene24627 biogeco3 v1.0 196
AutoFact: Strictosidine synthase, putative n=1 Tax=Ricinus communis RepID=B9RJ21_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: strictosidine synthase family protein 0.0
Putative C-terminus
biog3_v1.0_unigene24653 biogeco3 v1.0 241
AutoFact: DUF3584 multi-domain protein 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
biog3_v1.0_unigene24715 biogeco3 v1.0 569
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
biog3_v1.0_unigene24723 biogeco3 v1.0 623
AutoFact: elongation factor like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u5 small nuclear ribonucleoprotein component 0.0
Putative C-terminus
biog3_v1.0_unigene25119 biogeco3 v1.0 249
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AED97054.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phagocyte signaling-impaired 8.50243e-34
Internal
biog3_v1.0_unigene25433 biogeco3 v1.0 191
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: imp dehydrogenase gmp 1.8695e-18
Internal
biog3_v1.0_unigene25514 biogeco3 v1.0 250
AutoFact: strictosidine synthase-like 3 [Arabidopsis thaliana] gb|AAL31926.1|AF419594_1 At1g08470/T27G7_9 [Arabidopsis thaliana] gb|AAL36403.1| unknown protein [Arabidopsis thaliana] gb|AAM51389.1| unknown protein [Arabidopsis thaliana] gb|AEE28296.1| strictosidine 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: strictosidine synthase family protein 0.0
Internal
biog3_v1.0_unigene25753 biogeco3 v1.0 347
AutoFact: Short chain alcohol dehydrogenase, putative n=1 Tax=Ricinus communis RepID=B9T6C0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: short chain alcohol 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain