Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Ribosomal protein S17

Term: IPR000266  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene414 biogeco3 v1.0 871
AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s11 0.0
Complete
biog3_v1.0_unigene2082 biogeco3 v1.0 795
AutoFact: 30S ribosomal protein S17, putative n=1 Tax=Ricinus communis RepID=B9RQK5_RICCO 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s17 0.0
Complete
biog3_v1.0_unigene2581 biogeco3 v1.0 834
AutoFact: DUF707 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative C-terminus
biog3_v1.0_unigene4273 biogeco3 v1.0 1318
AutoFact: DUF707 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysine ketoglutarate reductase trans-splicing related 1 0.0
N-terminus
biog3_v1.0_unigene8911 biogeco3 v1.0 235
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 53-like 0.0
C-terminus
biog3_v1.0_unigene8974 biogeco3 v1.0 977
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 53-like 0.0
C-terminus
biog3_v1.0_unigene10235 biogeco3 v1.0 391
AutoFact: Pectinesterase n=2 Tax=Selaginella moellendorffii RepID=D8QSP7_SELML 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectinesterase family protein 0.0
Internal
biog3_v1.0_unigene14365 biogeco3 v1.0 336
AutoFact: DUF707 domain containing protein 0.0
Blast2go: lysine ketoglutarate reductase trans-splicing related 1 0.0
unknown
biog3_v1.0_unigene14829 biogeco3 v1.0 369
AutoFact: Pectinesterase n=2 Tax=Selaginella moellendorffii RepID=D8QSP7_SELML 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectinesterase family protein 0.0
C-terminus
biog3_v1.0_unigene14960 biogeco3 v1.0 476
AutoFact: Pectinesterase n=1 Tax=Populus trichocarpa RepID=B9N5H3_POPTR 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 53-like 0.0
Internal
biog3_v1.0_unigene17865 biogeco3 v1.0 201
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9P2L6_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 68-like 0.0
Internal
biog3_v1.0_unigene19312 biogeco3 v1.0 452
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
Blast2go: probable pectinesterase 53-like 0.0
Putative coding
biog3_v1.0_unigene24281 biogeco3 v1.0 131
AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
Blast2go: 40s ribosomal protein s11 0.0
unknown
biog3_v1.0_unigene24642 biogeco3 v1.0 424
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 53-like 0.0
N-terminus
biog3_v1.0_unigene25664 biogeco3 v1.0 902
AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s11 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain