|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene86
|
biogeco3 v1.0
|
866
|
|
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO
|
0.0
|
|
• FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM
|
0.0
|
|
• Blast2go: atp-dependent helicase brm-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene322
|
biogeco3 v1.0
|
577
|
|
• AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD
|
0.0
|
|
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: atp-dependent helicase rhp16-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene334
|
biogeco3 v1.0
|
261
|
|
• AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD
|
0.0
|
|
• Blast2go: atp-dependent helicase rhp16-like
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene336
|
biogeco3 v1.0
|
680
|
|
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar
|
0.0
|
|
• FL-Next: Isoform 2 of E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana GN=HUB2
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene396
|
biogeco3 v1.0
|
646
|
|
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain
|
1.0e-10
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ubiquitin-protein ligase zinc ion binding protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene539
|
biogeco3 v1.0
|
508
|
|
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO
|
0.0
|
|
• FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM
|
0.0
|
|
• Blast2go: atp-dependent helicase brm-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene691
|
biogeco3 v1.0
|
323
|
|
• AutoFact: [R] COG2319 FOG: WD40 repeat
|
4.0e-18
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein spa1-related 3-like
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene816
|
biogeco3 v1.0
|
388
|
|
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei
|
0.0
|
|
• Blast2go: probable e3 ubiquitin-protein ligase ari7-like
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene819
|
biogeco3 v1.0
|
311
|
|
• AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO
|
0.0
|
|
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: at5g13530-like protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1355
|
biogeco3 v1.0
|
611
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: sp=Uncharacterized protein At4g10930; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1370
|
biogeco3 v1.0
|
520
|
|
• AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGI2.1|Y1677_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g67720; Flags: Precursor gb|ACN59267.1| leucine-rich repeat receptor-like
|
0.0
|
|
• Blast2go: probable lrr receptor-like serine threonine-protein kinase at1g67720-like
|
0.0
|
|
Putative coding
|
|
biog3_v1.0_unigene1678
|
biogeco3 v1.0
|
284
|
|
• AutoFact: zinc finger-related and helicase and IBR domain-containing protein [Arabidopsis thaliana] sp|P0CE10.1|Y4102_ARATH RecName: Full=Putative uncharacterized protein At4g01020, chloroplastic; Flags: Precursor gb|AEE81967.1| zinc finger-related and helicase and
|
0.0
|
|
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: uncharacterized protein chloroplastic-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1822
|
biogeco3 v1.0
|
373
|
|
• AutoFact: pfam00271, Helicase_C, Helicase conserved C-terminal domain
|
6.0e-16
|
|
• Blast2go: helicase and zinc finger domain-containing protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene1871
|
biogeco3 v1.0
|
502
|
|
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: atp-dependent helicase brm-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1876
|
biogeco3 v1.0
|
542
|
|
• AutoFact: arabinose kinase [Arabidopsis thaliana] sp|O23461.1|ARAK_ARATH RecName: Full=L-arabinokinase; Short=AtISA1 emb|CAB10392.1| galactokinase like protein [Arabidopsis thaliana] emb|CAB78655.1| galactokinase like protein [Arabidopsis thaliana] gb|AEE83696.1| a
|
0.0
|
|
• FL-Next: sp=L-arabinokinase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: galactokinase like protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1917
|
biogeco3 v1.0
|
736
|
|
• AutoFact: putative helicase [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna helicase ino80-like
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene1978
|
biogeco3 v1.0
|
682
|
|
• AutoFact: YDG_SRA multi-domain protein
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: zinc finger
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene2071
|
biogeco3 v1.0
|
1247
|
|
• AutoFact: Ankyrin-repeat containing protein, putative n=1 Tax=Ricinus communis RepID=B9RG78_RICCO
|
0.0
|
|
• FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: at5g13530-like protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene2099
|
biogeco3 v1.0
|
945
|
|
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974453.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974454.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001190122.1| RING/U-box domain-con
|
2.0e-29
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: zinc c3hc4 type family protein
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene2219
|
biogeco3 v1.0
|
709
|
|
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei
|
0.0
|
|
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
