|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene5146
|
biogeco3 v1.0
|
565
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ring zinc finger
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene5165
|
biogeco3 v1.0
|
283
|
|
• AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase rglg2-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5175
|
biogeco3 v1.0
|
658
|
|
• AutoFact: DUF221 domain containing protein
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5225
|
biogeco3 v1.0
|
337
|
|
• AutoFact: copine-like protein [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase rglg1-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5272
|
biogeco3 v1.0
|
907
|
|
• AutoFact: seven in absentia-like protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ubiquitin ligase sinat3
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5295
|
biogeco3 v1.0
|
302
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: c3h2c3 ring-finger
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5355
|
biogeco3 v1.0
|
365
|
|
• AutoFact: [R] COG0666 FOG: Ankyrin repeat
|
3.0e-07
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5399
|
biogeco3 v1.0
|
326
|
|
• AutoFact: putative helicase [Arabidopsis thaliana]
|
0.0
|
|
• Blast2go: dna helicase ino80-like
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene5405
|
biogeco3 v1.0
|
406
|
|
• AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group]
|
3.0e-14
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: zinc-finger protein
|
3.52208e-22
|
|
Internal
|
|
biog3_v1.0_unigene5424
|
biogeco3 v1.0
|
235
|
|
• AutoFact: WS0374.C21_B21 SS-B-N-22 Picea sitchensis cDNA clone WS0374_B21 3', mRNA sequence.
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5452
|
biogeco3 v1.0
|
631
|
|
• AutoFact: RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group]
|
1.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
2.6633e-24
|
|
N-terminus
|
|
biog3_v1.0_unigene5459
|
biogeco3 v1.0
|
451
|
|
• AutoFact: E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana] sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3 ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis 1 protein emb|CAA11891.1| PRT1 [Arabidopsis thaliana] emb|CAA11892.1| PRT1 [Arabidopsis thaliana] dbj|
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase prt1
|
0.0
|
|
Putative coding
|
|
biog3_v1.0_unigene5477
|
biogeco3 v1.0
|
659
|
|
• AutoFact: [K] COG5175 Transcriptional repressor
|
1.0e-07
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ring u-box domain-containing protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5523
|
biogeco3 v1.0
|
396
|
|
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974785.1| RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAC01778.1| putative protein [Arabidopsis thaliana] gb|AAM98197.1| unknown protein [Arabidopsis thaliana] gb|AAP13
|
1.96182e-44
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase at3g02290-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5534
|
biogeco3 v1.0
|
233
|
|
• AutoFact: RecName: Full=Probable protein phosphatase 2C 43; Short=OsPP2C43 emb|CAD41383.2| OSJNBa0088A01.23 [Oryza sativa Japonica Group] gb|EAY95304.1| hypothetical protein OsI_17129 [Oryza sativa Indica Group] gb|EAZ31769.1| hypothetical protein OsJ_15921 [Oryza
|
2.0e-29
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
9.42167e-37
|
|
Internal
|
|
biog3_v1.0_unigene5536
|
biogeco3 v1.0
|
371
|
|
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEE31132.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Zinc ion binding protein, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: ring fyve phd zinc finger-containing protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5591
|
biogeco3 v1.0
|
665
|
|
• AutoFact: E3 ubiquitin ligase BIG BROTHER [Arabidopsis thaliana] ref|NP_001030922.1| E3 ubiquitin ligase BIG BROTHER [Arabidopsis thaliana] sp|Q8L649.1|BB_ARATH RecName: Full=E3 ubiquitin ligase BIG BROTHER; AltName: Full=Protein ENHANCER OF DA1-1 emb|CAD32249.1| p
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene5654
|
biogeco3 v1.0
|
544
|
|
• AutoFact: RecName: Full=Protein spotted leaf 11; AltName: Full=Cell death-related protein SPL11 sp|Q0IMG9.2|SL11_ORYSJ RecName: Full=E3 ubiquitin-protein ligase SPL11; AltName: Full=Cell death-related protein SPL11; AltName: Full=Protein spotted leaf 11 gb|AAT94160
|
1.99965e-42
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ubiquitin-protein pub12
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5690
|
biogeco3 v1.0
|
339
|
|
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene5709
|
biogeco3 v1.0
|
406
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: dna binding
|
0.0
|
|
Internal
|
