|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene3046
|
biogeco3 v1.0
|
672
|
|
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain
|
7.0e-14
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ring u-box domain-containing protein
|
0.0
|
|
Putative Complete
|
|
biog3_v1.0_unigene3087
|
biogeco3 v1.0
|
1076
|
|
• AutoFact: cellulose synthase 6 [Populus tremuloides]
|
0.0
|
|
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis).
|
0.0
|
|
• Blast2go: cellulose synthase
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3106
|
biogeco3 v1.0
|
431
|
|
• AutoFact: WS0374.C21_B21 SS-B-N-22 Picea sitchensis cDNA clone WS0374_B21 3', mRNA sequence.
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Putative coding
|
|
biog3_v1.0_unigene3111
|
biogeco3 v1.0
|
781
|
|
• AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH
|
3.0e-23
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ring u-box domain-containing protein
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene3150
|
biogeco3 v1.0
|
804
|
|
• AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chromatin remodeling complex subunit
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene3205
|
biogeco3 v1.0
|
858
|
|
• AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: nuclear protein x1
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene3314
|
biogeco3 v1.0
|
340
|
|
• AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI
|
0.0
|
|
• FL-Next: sp=Protein translocase subunit SecA; Phaeodactylum tricornutum (strain CCAP 1055/1). Plastid; Chloroplast.
|
0.0
|
|
• Blast2go: preprotein translocase seca-like protein
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene3322
|
biogeco3 v1.0
|
469
|
|
• AutoFact: Zinc finger, RING-type [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3337
|
biogeco3 v1.0
|
578
|
|
• AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2
|
9.0e-28
|
|
• FL-Next: tr=Brca1-associated protein, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: brca1-associated protein
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene3382
|
biogeco3 v1.0
|
341
|
|
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar
|
0.0
|
|
• FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 2; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3420
|
biogeco3 v1.0
|
454
|
|
• AutoFact: putative methyltransferase PMT11 [Arabidopsis thaliana] sp|O22285.1|PMTB_ARATH RecName: Full=Probable methyltransferase PMT11 gb|AAB87124.1| expressed protein [Arabidopsis thaliana] gb|AAK96646.1| At2g39750/T5I7.5 [Arabidopsis thaliana] gb|AAM70566.1| At2
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: probable methyltransferase pmt11-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3452
|
biogeco3 v1.0
|
683
|
|
• AutoFact: IBR domain containing protein
|
7.0e-07
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: probable e3 ubiquitin-protein ligase rnf144a-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3535
|
biogeco3 v1.0
|
204
|
|
• AutoFact: E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana] sp|Q8LBL5.2|PRT1_ARATH RecName: Full=E3 ubiquitin-protein ligase PRT1; AltName: Full=Proteolysis 1 protein emb|CAA11891.1| PRT1 [Arabidopsis thaliana] emb|CAA11892.1| PRT1 [Arabidopsis thaliana] dbj|
|
0.0
|
|
• FL-Next: sp=E3 ubiquitin-protein ligase PRT1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase prt1
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3539
|
biogeco3 v1.0
|
607
|
|
• AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] dbj|BAB71851.1| kinesin-related protein [Arabidopsis thaliana] gb|AEE30148.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Kinesin heavy chain, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3600
|
biogeco3 v1.0
|
326
|
|
• AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ring finger protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene3610
|
biogeco3 v1.0
|
537
|
|
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO
|
9.80909e-45
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein binding
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3647
|
biogeco3 v1.0
|
298
|
|
• AutoFact: Zinc finger, RING-type [Medicago truncatula]
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase rhf2a
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene3699
|
biogeco3 v1.0
|
341
|
|
• AutoFact: Cellulose synthase catalytic subunit n=1 Tax=Pinus taeda RepID=Q5DI94_PINTA
|
0.0
|
|
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine).
|
0.0
|
|
• Blast2go: cellulose synthase
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene3714
|
biogeco3 v1.0
|
552
|
|
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO
|
0.0
|
|
• Blast2go: protein binding
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene3733
|
biogeco3 v1.0
|
514
|
|
• AutoFact: 7-fold repeat in clathrin and VPS proteins repeat-containing protein [Dictyostelium discoideum AX4] gb|EAL72312.1| 7-fold repeat in clathrin and VPS proteins repeat-containing protein [Dictyostelium discoideum AX4]
|
7.0e-40
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: vacuolar protein sorting-associated protein 18 homolog
|
0.0
|
|
Internal
|
