Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene25867 biogeco3 v1.0 404
AutoFact: DUF716 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene26038 biogeco3 v1.0 309
AutoFact: Kinesin-like protein NACK1 n=1 Tax=Nicotiana tabacum RepID=Q8S950_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin-like protein 0.0
Internal
biog3_v1.0_unigene26052 biogeco3 v1.0 476
AutoFact: putative methyltransferase PMT6 [Arabidopsis thaliana] sp|Q84TJ0.1|PMT6_ARATH RecName: Full=Probable methyltransferase PMT6 gb|AAO64151.1| unknown protein [Arabidopsis thaliana] dbj|BAF00512.1| hypothetical protein [Arabidopsis thaliana] gb|AEE74871.1| pu 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt7-like 0.0
C-terminus
biog3_v1.0_unigene26060 biogeco3 v1.0 287
AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 5.0e-16
Blast2go: ring u-box domain-containing protein 0.0
unknown
biog3_v1.0_unigene26063 biogeco3 v1.0 227
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
biog3_v1.0_unigene26065 biogeco3 v1.0 448
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: ubiquitin ligase 0.0
Complete
biog3_v1.0_unigene26139 biogeco3 v1.0 128
AutoFact: Copine, putative n=1 Tax=Ricinus communis RepID=B9RAR5_RICCO 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2-like 0.0
unknown
biog3_v1.0_unigene26193 biogeco3 v1.0 366
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAR92268.1| At1g47570 [Arabidopsis thaliana] gb|AAS99681.1| At1g47570 [Arabidopsis thaliana] gb|AEE32187.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Putative N-terminus
biog3_v1.0_unigene26229 biogeco3 v1.0 393
AutoFact: putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_849736.1| putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_973949.1| putative methyltransferase PMT20 [Arabidopsis thaliana] sp|Q9C6S7.1|PMTK_ARATH RecName: Full=Probable methylt 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyltransferase pmt20 0.0
Putative C-terminus
biog3_v1.0_unigene26269 biogeco3 v1.0 444
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
Internal
biog3_v1.0_unigene26392 biogeco3 v1.0 282
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-10
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene26562 biogeco3 v1.0 833
AutoFact: DUF716 domain containing protein 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene26622 biogeco3 v1.0 1031
AutoFact: DUF716 domain containing protein 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene26630 biogeco3 v1.0 527
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain