|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene50
|
biogeco3 v1.0
|
770
|
|
• AutoFact: E3 ubiquitin ligase BIG BROTHER [Arabidopsis thaliana] ref|NP_001030922.1| E3 ubiquitin ligase BIG BROTHER [Arabidopsis thaliana] sp|Q8L649.1|BB_ARATH RecName: Full=E3 ubiquitin ligase BIG BROTHER; AltName: Full=Protein ENHANCER OF DA1-1 emb|CAD32249.1| p
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene86
|
biogeco3 v1.0
|
866
|
|
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO
|
0.0
|
|
• FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM
|
0.0
|
|
• Blast2go: atp-dependent helicase brm-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene122
|
biogeco3 v1.0
|
1576
|
|
• AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: methyltransferase pmt3
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene143
|
biogeco3 v1.0
|
799
|
|
• AutoFact: Protein binding protein n=3 Tax=Andropogoneae RepID=B6SPB5_MAIZE
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein binding protein
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene196
|
biogeco3 v1.0
|
348
|
|
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF23258.1|AC015985_16 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAF23312.1|AC016661_37 unknown protein [Arabidopsis thaliana] gb|AAL66972.1| putative RING zinc finger protei
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase mgrn1-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene289
|
biogeco3 v1.0
|
930
|
|
• AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein phosphatase
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene296
|
biogeco3 v1.0
|
306
|
|
• AutoFact: maternal effect embryo arrest 12 protein [Arabidopsis thaliana] gb|AAU44442.1| hypothetical protein AT2G02955 [Arabidopsis thaliana] gb|AEC05644.1| maternal effect embryo arrest 12 protein [Arabidopsis thaliana]
|
1.0e-22
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: maternal effect embryo arrest 12 protein
|
1.81476e-35
|
|
Internal
|
|
biog3_v1.0_unigene322
|
biogeco3 v1.0
|
577
|
|
• AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD
|
0.0
|
|
• FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: atp-dependent helicase rhp16-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene334
|
biogeco3 v1.0
|
261
|
|
• AutoFact: PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI00019843BD
|
0.0
|
|
• Blast2go: atp-dependent helicase rhp16-like
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene336
|
biogeco3 v1.0
|
680
|
|
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar
|
0.0
|
|
• FL-Next: Isoform 2 of E3 ubiquitin-protein ligase BRE1-like 2 OS=Arabidopsis thaliana GN=HUB2
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene340
|
biogeco3 v1.0
|
331
|
|
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SLY6_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: zinc finger
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene396
|
biogeco3 v1.0
|
646
|
|
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain
|
1.0e-10
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ubiquitin-protein ligase zinc ion binding protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene539
|
biogeco3 v1.0
|
508
|
|
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO
|
0.0
|
|
• FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM
|
0.0
|
|
• Blast2go: atp-dependent helicase brm-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene547
|
biogeco3 v1.0
|
347
|
|
• AutoFact: RING Zn-finger domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4IK69_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene568
|
biogeco3 v1.0
|
332
|
|
• AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: atpase splayed
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene605
|
biogeco3 v1.0
|
258
|
|
• AutoFact: pfam05495, zf-CHY, CHY zinc finger
|
6.0e-29
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: zinc finger
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene644
|
biogeco3 v1.0
|
434
|
|
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R6Q1_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein binding
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene691
|
biogeco3 v1.0
|
323
|
|
• AutoFact: [R] COG2319 FOG: WD40 repeat
|
4.0e-18
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein spa1-related 3-like
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene731
|
biogeco3 v1.0
|
865
|
|
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9
|
1.0e-32
|
|
• Blast2go: ring u-box domain-containing protein
|
1.4013e-45
|
|
Putative coding
|
|
biog3_v1.0_unigene755
|
biogeco3 v1.0
|
1937
|
|
• AutoFact: putative methyltransferase PMT21 [Arabidopsis thaliana] ref|NP_849408.1| putative methyltransferase PMT21 [Arabidopsis thaliana] sp|Q94II3.1|PMTL_ARATH RecName: Full=Probable methyltransferase PMT21; AltName: Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 3
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: methyltransferase pmt20
|
0.0
|
|
Complete
|
