|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene5117
|
biogeco3 v1.0
|
413
|
|
• AutoFact: ATP-dependent peptidase, putative n=1 Tax=Ricinus communis RepID=B9RIL2_RICCO
|
0.0
|
|
• FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5152
|
biogeco3 v1.0
|
624
|
|
• AutoFact: putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] dbj|BAD82096.1| putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] gb|EAY76689.1| hypothetical protein OsI_04643 [Oryza sativa Indica Group] gb|EAZ14353.1| hypothetical p
|
0.0
|
|
• Blast2go: rna-binding region-containing
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene5172
|
biogeco3 v1.0
|
301
|
|
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85976.1| unknown protein [Arabidopsis thaliana] gb|AAM67536.1| unknown protein [Arabidopsis thaliana] dbj|BAD94504.1| hypo
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene5207
|
biogeco3 v1.0
|
1110
|
|
• AutoFact: homeodomain-leucine zipper protein 57 [Glycine max]
|
5.0e-34
|
|
• Blast2go: homeobox-leucine zipper protein athb-6-like
|
2.01282e-38
|
|
Coding
|
|
biog3_v1.0_unigene5225
|
biogeco3 v1.0
|
337
|
|
• AutoFact: copine-like protein [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: e3 ubiquitin-protein ligase rglg1-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5247
|
biogeco3 v1.0
|
962
|
|
• AutoFact: RRM_1 domain containing protein
|
6.0e-05
|
|
• FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: zinc finger ccch domain-containing protein 18-like
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene5262
|
biogeco3 v1.0
|
516
|
|
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana] gb|AAL85976.1| unknown protein [Arabidopsis thaliana] gb|AAM67536.1| unknown protein [Arabidopsis thaliana] dbj|BAD94504.1| hypo
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene5268
|
biogeco3 v1.0
|
726
|
|
• AutoFact: pre-mRNA branch site protein p14 [Arabidopsis thaliana] ref|XP_002873554.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] sp|Q9FMP4.1|PM14_ARATH RecName: Full=Pre-mRNA branch site p14-like protein dbj|BAB10037.1| unnamed prot
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: pre-mrna branch site p14-like protein
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene5307
|
biogeco3 v1.0
|
269
|
|
• AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO
|
0.0
|
|
• Blast2go: phytochrome a-associated f-box protein
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene5330
|
biogeco3 v1.0
|
781
|
|
• AutoFact: cell division protease ftsH-11 [Arabidopsis thaliana] sp|Q9FGM0.1|FTSHB_ARATH RecName: Full=ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial; Short=AtFTSH11; Flags: Precursor dbj|BAB08420.1| cell division protein FtsH protease-like
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: atp-dependent zinc metalloprotease ftsh chloroplastic mitochondrial-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5331
|
biogeco3 v1.0
|
570
|
|
• AutoFact: Os08g0486200 protein n=3 Tax=Oryza sativa RepID=Q6ZDR7_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5380
|
biogeco3 v1.0
|
379
|
|
• AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-]
|
0.0
|
|
• FL-Next: sp=ATP-dependent zinc metalloprotease FTSH 8, mitochondrial; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5415
|
biogeco3 v1.0
|
1077
|
|
• AutoFact: Os02g0252100 protein n=7 Tax=Oryza sativa RepID=Q6K542_ORYSJ
|
1.0e-39
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: pre-mrna splicing factor
|
0.0
|
|
Putative Complete
|
|
biog3_v1.0_unigene5483
|
biogeco3 v1.0
|
553
|
|
• AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: dna mismatch repair protein mlh1
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5490
|
biogeco3 v1.0
|
262
|
|
• AutoFact: poly(A)-binding protein [Cucumis sativus]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: poly -binding protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5529
|
biogeco3 v1.0
|
638
|
|
• AutoFact: putative transformer serine/arginine-rich ribonucleoprotein [Oryza sativa Japonica Group] gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group]
|
2.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
1.42718e-37
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene5745
|
biogeco3 v1.0
|
664
|
|
• AutoFact: bZIP_2 domain containing protein
|
4.0e-10
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene5778
|
biogeco3 v1.0
|
321
|
|
• AutoFact: poly(A)-binding protein [Cucumis sativus]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: poly -binding protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5831
|
biogeco3 v1.0
|
1774
|
|
• AutoFact: MEI2-like protein 5 [Arabidopsis thaliana] ref|NP_849727.1| MEI2-like protein 5 [Arabidopsis thaliana] sp|Q8VWF5.1|AML5_ARATH RecName: Full=Protein MEI2-like 5; Short=AML5; AltName: Full=MEI2-like protein 5 gb|AAL32691.1| RNA-binding protein MEI2, putativ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein mei2-like 2-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene5849
|
biogeco3 v1.0
|
913
|
|
• AutoFact: Calmodulin binding protein, putative n=1 Tax=Ricinus communis RepID=B9T1E0_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: calmodulin binding
|
0.0
|
|
Internal
|
