|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene861
|
biogeco3 v1.0
|
390
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7SM13_VITVI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna binding
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene905
|
biogeco3 v1.0
|
688
|
|
• AutoFact: Mitochondrial respiratory chain complexes assembly protein AFG3, putative (EC:3.6.4.3); K08956 AFG3 family protein [EC:3.4.24.-]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene989
|
biogeco3 v1.0
|
457
|
|
• AutoFact: putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
|
0.0
|
|
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: rna-dependent rna polymerase 6
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1107
|
biogeco3 v1.0
|
393
|
|
• AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana] gb|AAL86001.1| unknown protein [Arabidopsis thaliana] gb|AAM45065.1| unknown protein [Arab
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ras-gtpase-activating protein-binding
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1129
|
biogeco3 v1.0
|
1157
|
|
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene1173
|
biogeco3 v1.0
|
1664
|
|
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S3Y1_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna binding
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene1193
|
biogeco3 v1.0
|
457
|
|
• AutoFact: Os01g0367300 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q5JJM4_ORYSJ
|
7.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: copper ion binding
|
3.29634e-21
|
|
Internal
|
|
biog3_v1.0_unigene1220
|
biogeco3 v1.0
|
328
|
|
• AutoFact: Ubiquitin system component Cue protein [Arabidopsis thaliana] gb|AEE30873.1| Ubiquitin system component Cue protein [Arabidopsis thaliana]
|
1.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Trifolium repens (Creeping white clover).
|
0.0
|
|
• Blast2go: ubiquitin system component cue protein
|
6.34634e-37
|
|
Internal
|
|
biog3_v1.0_unigene1235
|
biogeco3 v1.0
|
689
|
|
• AutoFact: splicing factor 3B subunit 4 [Arabidopsis thaliana] gb|AAD12222.1| putative spliceosome associated protein [Arabidopsis thaliana] gb|AAN12991.1| putative spliceosome-associated protein [Arabidopsis thaliana] gb|AEC06776.1| splicing factor 3B subunit 4 [Ar
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: splicing factor 3b subunit 4-like
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene1240
|
biogeco3 v1.0
|
493
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g04810, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: pentatricopeptide repeat-containing protein
|
1.94502e-32
|
|
C-terminus
|
|
biog3_v1.0_unigene1251
|
biogeco3 v1.0
|
368
|
|
• AutoFact: putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group] dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa Japonica Group]
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene1345
|
biogeco3 v1.0
|
366
|
|
• AutoFact: PWWP domain-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L3U3_ARALL
|
2.94273e-44
|
|
• Blast2go: pwwp domain-containing protein
|
0.0
|
|
Putative coding
|
|
biog3_v1.0_unigene1381
|
biogeco3 v1.0
|
319
|
|
• AutoFact: polypyrimidine tract-binding protein 2 [Arabidopsis thaliana] sp|Q9FGL9.1|PTBP2_ARATH RecName: Full=Polypyrimidine tract-binding protein homolog 2 dbj|BAB08421.1| polypyrimidine tract-binding RNA transport protein-like [Arabidopsis thaliana] gb|AAU90050.1
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene1412
|
biogeco3 v1.0
|
484
|
|
• AutoFact: transmembrane protein 14C [Arabidopsis thaliana] gb|AAK91438.1| AT3g43520/T18D12_90 [Arabidopsis thaliana] gb|AAN18102.1| At3g43520/T18D12_90 [Arabidopsis thaliana] gb|AEE77802.1| transmembrane protein 14C [Arabidopsis thaliana]
|
9.0e-17
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1429
|
biogeco3 v1.0
|
355
|
|
• AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna-binding protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1436
|
biogeco3 v1.0
|
770
|
|
• AutoFact: Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RAR1_RICCO
|
5.0e-21
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna-binding protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1445
|
biogeco3 v1.0
|
994
|
|
• AutoFact: RNA binding protein-like protein n=1 Tax=Solanum tuberosum RepID=Q2VCH8_SOLTU
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: mki67 fha domain-interacting nucleolar phospho
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene1459
|
biogeco3 v1.0
|
922
|
|
• AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SHJ5_RICCO
|
0.0
|
|
• FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: rna-binding protein 40-like
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene1578
|
biogeco3 v1.0
|
631
|
|
• AutoFact: putative RNA binding ribonucleoprotein [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Expressed protein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: rna recognition motif-containing protein
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene1654
|
biogeco3 v1.0
|
311
|
|
• AutoFact: Homeobox transcription factor n=1 Tax=Jatropha curcas RepID=D6PAP4_9ROSI
|
1.0e-06
|
|
• Blast2go: uncharacterized protein at1g27050-like
|
0.0
|
|
unknown
|
