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Assembly Name: biogeco3 v1.0

Name: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site

Term: IPR018200  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene546 biogeco3 v1.0 409
• AutoFact: histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] gb|AEE35961.1| histone-lysine N-methyltransferase SETD2 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Huntingtin interacting protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: set domain protein 0.0
Internal
biog3_v1.0_unigene845 biogeco3 v1.0 1082
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9SWA7_RICCO 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 5-like 0.0
Internal
biog3_v1.0_unigene1782 biogeco3 v1.0 1155
• AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
• FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
C-terminus
biog3_v1.0_unigene2064 biogeco3 v1.0 410
• AutoFact: Transcription factor (Fragment) n=1 Tax=Lycoris longituba RepID=D6MK24_9ASPA 8.0e-36
• Blast2go: transcription factor bhlh121-like 6.02558e-44
Putative coding
biog3_v1.0_unigene3230 biogeco3 v1.0 701
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SFU8_PHYPA 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene3775 biogeco3 v1.0 308
• AutoFact: ubiquitin carboxyl-terminal hydrolase 2 [Arabidopsis thaliana] sp|Q8W4N3.2|UBP2_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName: Full=Deubiquitinating enzyme 2; Short=AtUBP2; AltName: Full=Ubiquitin thiolesterase 2; AltName: Full=Ubiq 1.0e-07
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 2.27539e-11
Internal
biog3_v1.0_unigene3936 biogeco3 v1.0 412
• AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
biog3_v1.0_unigene4224 biogeco3 v1.0 620
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Selaginella moellendorffii RepID=D8S7A6_SELML 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4591 biogeco3 v1.0 482
• AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9H7V1_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone-lysine n-methyltransferase ashh1-like 0.0
Putative C-terminus
biog3_v1.0_unigene4643 biogeco3 v1.0 1166
• AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene4873 biogeco3 v1.0 396
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SU81_VITVI 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 26-like 0.0
Internal
biog3_v1.0_unigene5542 biogeco3 v1.0 495
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TR00_VITVI 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 25; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 25-like 0.0
Internal
biog3_v1.0_unigene5589 biogeco3 v1.0 361
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Selaginella moellendorffii RepID=D8S7A6_SELML 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene6012 biogeco3 v1.0 1900
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Picea sitchensis RepID=A9NUT3_PICSI 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 6 0.0
Complete
biog3_v1.0_unigene6047 biogeco3 v1.0 514
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CSV0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 0.0
Internal
biog3_v1.0_unigene6200 biogeco3 v1.0 531
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CSV0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 0.0
N-terminus
biog3_v1.0_unigene6271 biogeco3 v1.0 858
• AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene6596 biogeco3 v1.0 346
• AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
• FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Internal
biog3_v1.0_unigene6972 biogeco3 v1.0 1133
• AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
C-terminus
biog3_v1.0_unigene7103 biogeco3 v1.0 666
• AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain