Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: ABC transporter, conserved site

Term: IPR017871  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene109 biogeco3 v1.0 204
AutoFact: CRT (chloroquine-resistance transporter)-like transporter 1 [Arabidopsis thaliana] gb|ABJ17107.1| At5g19380 [Arabidopsis thaliana] gb|AED92693.1| CRT (chloroquine-resistance transporter)-like transporter 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: crt homolog 1-like 0.0
Internal
biog3_v1.0_unigene456 biogeco3 v1.0 434
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5V6_RICCO 0.0
FL-Next: sp=Receptor-like serine/threonine-protein kinase ALE2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: receptor-like serine threonine-protein kinase ale2-like 0.0
Internal
biog3_v1.0_unigene647 biogeco3 v1.0 518
AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: smc3 protein 0.0
Putative C-terminus
biog3_v1.0_unigene677 biogeco3 v1.0 378
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AEE31353.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat protein kinase-like protein 0.0
Putative N-terminus
biog3_v1.0_unigene750 biogeco3 v1.0 456
AutoFact: MDR-like ABC transporter n=1 Tax=Ginkgo biloba RepID=E6Y0T2_GINBI 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: multidrug pheromone mdr abc transporter family 0.0
Putative C-terminus
biog3_v1.0_unigene808 biogeco3 v1.0 364
AutoFact: Receptor-like kinase (Fragment) n=1 Tax=Marchantia polymorpha RepID=A7VM26_MARPO 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene820 biogeco3 v1.0 430
AutoFact: structural maintenance of chromosomes 1 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Internal
biog3_v1.0_unigene869 biogeco3 v1.0 415
AutoFact: structural maintenance of chromosomes (SMC) - like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Structural maintenance of chromosomes protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: structural maintenance of chromosomes 1 0.0
Internal
biog3_v1.0_unigene873 biogeco3 v1.0 787
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9FNK5.1|FB285_ARATH RecName: Full=F-box protein At5g46170 dbj|BAB08262.1| unnamed protein product [Arabidopsis thaliana] gb|AAL49842.1| unknown protein [Arabidopsis thaliana] gb|AAN13195.1| unknown protein [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
C-terminus
biog3_v1.0_unigene875 biogeco3 v1.0 835
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AEE31353.1| leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat protein kinase-like protein 0.0
Putative C-terminus
biog3_v1.0_unigene891 biogeco3 v1.0 304
AutoFact: acyl-CoA dehydrogenase [Arabidopsis thaliana] gb|AAM14036.1| unknown protein [Arabidopsis thaliana] gb|AAN86198.1| unknown protein [Arabidopsis thaliana] gb|AEE74461.1| acyl-CoA dehydrogenase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: acyl- dehydrogenase 0.0
Internal
biog3_v1.0_unigene941 biogeco3 v1.0 329
AutoFact: Peroxisomal abc transporter, putative n=1 Tax=Ricinus communis RepID=B9RQ07_RICCO 0.0
Blast2go: abc transporter d family member 0.0
unknown
biog3_v1.0_unigene1067 biogeco3 v1.0 364
AutoFact: pfam06470, SMC_hinge, SMC proteins Flexible Hinge Domain 1.0e-22
FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: condensin complex components subunit 0.0
Internal
biog3_v1.0_unigene1170 biogeco3 v1.0 372
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8S2N6_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
Internal
biog3_v1.0_unigene1207 biogeco3 v1.0 2443
AutoFact: ATP-binding cassette transporter [Pteris vittata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
Complete
biog3_v1.0_unigene1218 biogeco3 v1.0 528
AutoFact: ATP-binding cassette transporter n=2 Tax=Selaginella moellendorffii RepID=D8S2N6_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-binding cassette transporter 0.0
Putative N-terminus
biog3_v1.0_unigene1219 biogeco3 v1.0 556
AutoFact: RecName: Full=Pleiotropic drug resistance protein TUR2; Short=Protein Turion 2 emb|CAA94437.1| PDR5-like ABC transporter [Spirodela polyrhiza] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
biog3_v1.0_unigene1258 biogeco3 v1.0 484
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: sp=ABC transporter B family member 25, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
N-terminus
biog3_v1.0_unigene1312 biogeco3 v1.0 307
AutoFact: ABC transporter B family member 19 n=5 Tax=Camelineae RepID=AB19B_ARATH 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 19-like 0.0
Internal
biog3_v1.0_unigene1316 biogeco3 v1.0 338
AutoFact: Abc transporter, putative n=1 Tax=Ricinus communis RepID=B9RFV1_RICCO 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein trigalactosyldiacylglycerol chloroplastic-like 7.93294e-36
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain