Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Leucine-rich repeat

Term: IPR001611  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2239 biogeco3 v1.0 393
AutoFact: Metal tolerance protein 5 n=4 Tax=Poaceae RepID=MTP5_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: metal tolerance protein 0.0
Internal
biog3_v1.0_unigene2258 biogeco3 v1.0 847
AutoFact: Receptor-like kinase (Fragment) n=1 Tax=Marchantia polymorpha RepID=A7VM29_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene2264 biogeco3 v1.0 268
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tir-nbs-lrr protein 2.8026e-45
Internal
biog3_v1.0_unigene2325 biogeco3 v1.0 565
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: sp=Receptor-like protein kinase THESEUS 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: receptor-like protein kinase theseus 1-like 0.0
C-terminus
biog3_v1.0_unigene2384 biogeco3 v1.0 400
AutoFact: FERONIA receptor-like kinase [Cardamine flexuosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: feronia receptor-like kinase 0.0
C-terminus
biog3_v1.0_unigene2393 biogeco3 v1.0 253
AutoFact: TIR-NBS-LRR class disease resistance protein n=1 Tax=Arabidopsis thaliana RepID=F4J3L8_ARATH 3.0e-26
Blast2go: tmv resistance protein n-like 0.0
unknown
biog3_v1.0_unigene2554 biogeco3 v1.0 418
AutoFact: ABC transporter G family member 21 [Arabidopsis thaliana] sp|Q7XA72.2|AB21G_ARATH RecName: Full=ABC transporter G family member 21; Short=ABC transporter ABCG.21; Short=AtABCG21; AltName: Full=White-brown complex homolog protein 21; Short=AtWBC21 dbj|BAB0 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: white-brown-complex abc transporter family 0.0
Internal
biog3_v1.0_unigene2572 biogeco3 v1.0 406
AutoFact: protein kinase-like protein [Arabidopsis thaliana] gb|AAC09037.1| putative protein kinase [Arabidopsis thaliana] gb|AAT99800.1| At2g18890 [Arabidopsis thaliana] gb|AAU94416.1| At2g18890 [Arabidopsis thaliana] gb|AEC06821.1| protein kinase-like protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like serine threonine-protein kinase at5g57670-like 0.0
C-terminus
biog3_v1.0_unigene2574 biogeco3 v1.0 272
AutoFact: RING-H2 finger protein ATL13 [Arabidopsis thaliana] sp|Q940Q4.2|ATL13_ARATH RecName: Full=RING-H2 finger protein ATL13 gb|AEE85760.1| RING-H2 finger protein ATL13 [Arabidopsis thaliana] 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene2602 biogeco3 v1.0 1735
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 0.0
C-terminus
biog3_v1.0_unigene2691 biogeco3 v1.0 660
AutoFact: Drf_FH1 multi-domain protein 2.0e-23
Putative coding
biog3_v1.0_unigene2721 biogeco3 v1.0 318
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6X0_RICCO 0.0
Blast2go: ring-h2 finger protein atl13 0.0
Coding
biog3_v1.0_unigene2730 biogeco3 v1.0 442
AutoFact: Grr1, plant, putative n=1 Tax=Ricinus communis RepID=B9SET7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ein3-binding f-box protein 1-like 0.0
Internal
biog3_v1.0_unigene2779 biogeco3 v1.0 556
AutoFact: Somatic embryogenesis receptor kinase-like protein 3 n=1 Tax=Medicago truncatula RepID=E2IXG7_MEDTR 8.99999e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brassinosteroid insensitive 1-associated receptor kinase 1 expressed 0.0
Putative N-terminus
biog3_v1.0_unigene2780 biogeco3 v1.0 807
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog3_v1.0_unigene2785 biogeco3 v1.0 659
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ran-binding protein 0.0
Internal
biog3_v1.0_unigene2882 biogeco3 v1.0 920
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
C-terminus
biog3_v1.0_unigene2929 biogeco3 v1.0 897
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SB23_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
Putative N-terminus
biog3_v1.0_unigene2949 biogeco3 v1.0 309
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RXI4_PHYPA 3.0e-06
unknown
biog3_v1.0_unigene2963 biogeco3 v1.0 637
AutoFact: F-box family protein 0.0
FL-Next: sp=F-box/LRR-repeat protein At1g67190; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box lrr-repeat protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain