Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Leucine-rich repeat

Term: IPR001611  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene24698 biogeco3 v1.0 762
AutoFact: [R] COG2319 FOG: WD40 repeat 4.0e-07
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
Internal
biog3_v1.0_unigene24715 biogeco3 v1.0 569
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
biog3_v1.0_unigene24745 biogeco3 v1.0 771
AutoFact: CC-NBS-LRR resistance-like protein n=5 Tax=Pinaceae RepID=Q1L6F3_PINLA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nbs-lrr resistance protein 0.0
C-terminus
biog3_v1.0_unigene24772 biogeco3 v1.0 228
AutoFact: putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana] sp|C0LGH8.1|Y1634_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g63430; Flags: Precursor gb|ACN59263.1| leucine-rich repeat receptor-like 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase 0.0
Internal
biog3_v1.0_unigene24790 biogeco3 v1.0 488
AutoFact: CC-NBS-LRR resistance-like protein n=5 Tax=Pinaceae RepID=Q1L6F3_PINLA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nbs-lrr resistance protein 0.0
Internal
biog3_v1.0_unigene24821 biogeco3 v1.0 758
AutoFact: Gag and Pol n=1 Tax=Zea mays RepID=Q8LSK0_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
N-terminus
biog3_v1.0_unigene24872 biogeco3 v1.0 273
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
FL-Next: sp=F-box/LRR-repeat protein 15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene24917 biogeco3 v1.0 399
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ran-binding protein 0.0
N-terminus
biog3_v1.0_unigene24950 biogeco3 v1.0 115
AutoFact: [R] COG0457 FOG: TPR repeat 5.0e-10
FL-Next: sp=Protein TONSOKU; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein brushy 0.0
Internal
biog3_v1.0_unigene24995 biogeco3 v1.0 424
AutoFact: Putative receptor kinase n=1 Tax=Malus x domestica RepID=Q2LJM2_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
Putative N-terminus
biog3_v1.0_unigene25017 biogeco3 v1.0 351
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 7.0e-21
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Blast2go: ac069473_8gypsy ty-3 retroelement polyprotein 69905-74404 1.55313e-21
Putative C-terminus
biog3_v1.0_unigene25061 biogeco3 v1.0 1232
AutoFact: CC-NBS-LRR resistance-like protein n=5 Tax=Pinaceae RepID=Q1L6F3_PINLA 0.0
FL-Next: tr=CC-NBS-LRR resistance-like protein; Pinus lambertiana (Sugar pine). 0.0
Blast2go: cc-nbs-lrr protein 0.0
C-terminus
biog3_v1.0_unigene25066 biogeco3 v1.0 224
AutoFact: NBS-LRR disease resistance protein homologue n=2 Tax=Hordeum vulgare RepID=Q84KC6_HORVU 3.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene25074 biogeco3 v1.0 547
AutoFact: Leucine Rich Repeat family protein [Oryza sativa Japonica Group] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene25086 biogeco3 v1.0 125
AutoFact: Tubulin folding cofactor n=1 Tax=Populus trichocarpa RepID=B9IQ98_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: tubulin folding cofactor 0.0
Internal
biog3_v1.0_unigene25089 biogeco3 v1.0 462
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ran-binding protein 0.0
Internal
biog3_v1.0_unigene25164 biogeco3 v1.0 214
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QLK1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene25213 biogeco3 v1.0 255
AutoFact: somatic embryogenesis receptor kinase [Carica papaya] gb|ABY60779.1| somatic embryogenesis receptor kinase [Carica papaya] 0.0
FL-Next: tr=Somatic embryogenesis receptor-like kinase 1; Pinus massoniana. 0.0
Blast2go: somatic embryogenesis receptor kinase 0.0
N-terminus
biog3_v1.0_unigene25237 biogeco3 v1.0 251
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tir-nbs-lrr class disease resistance protein 5.07885e-24
Internal
biog3_v1.0_unigene25258 biogeco3 v1.0 380
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain