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Assembly Name: biogeco3 v1.0

Name: Leucine-rich repeat

Term: IPR001611  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene22168 biogeco3 v1.0 322
AutoFact: leucine-rich repeat-like protein [Arabidopsis thaliana] gb|AAG52300.1|AC011020_7 putative receptor protein kinase [Arabidopsis thaliana] gb|AAC18784.1| Similar to ERECTA receptor protein kinase gb|U47029 from A. thaliana [Arabidopsis thaliana] gb|ACN59266 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable inactive leucine-rich repeat receptor-like protein kinase at1g66830-like 0.0
Internal
biog3_v1.0_unigene22175 biogeco3 v1.0 164
AutoFact: Putative TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS6_PINMO 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: expression site-associated gene 8 protein 0.0
Putative C-terminus
biog3_v1.0_unigene22186 biogeco3 v1.0 256
AutoFact: F-box family protein 0.0
Blast2go: f-box lrr-repeat protein 0.0
unknown
biog3_v1.0_unigene22195 biogeco3 v1.0 228
AutoFact: Tubulin folding cofactor n=1 Tax=Populus trichocarpa RepID=B9IQ98_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: tubulin folding cofactor 0.0
N-terminus
biog3_v1.0_unigene22214 biogeco3 v1.0 451
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 9.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: toll-interleukin-resistance domain-containing protein 7.86221e-18
N-terminus
biog3_v1.0_unigene22232 biogeco3 v1.0 141
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene22239 biogeco3 v1.0 268
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
Internal
biog3_v1.0_unigene22249 biogeco3 v1.0 432
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene22256 biogeco3 v1.0 400
AutoFact: RING-H2 finger protein ATL52 [Arabidopsis thaliana] sp|Q9LF64.1|ATL52_ARATH RecName: Full=RING-H2 finger protein ATL52 emb|CAC01904.1| RING-H2 zinc finger protein-like [Arabidopsis thaliana] gb|AED92447.1| RING-H2 finger protein ATL52 [Arabidopsis thalian 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
C-terminus
biog3_v1.0_unigene22266 biogeco3 v1.0 329
AutoFact: NBS/LRR (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I8_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cc-nbs-lrr protein 0.0
Internal
biog3_v1.0_unigene22297 biogeco3 v1.0 203
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 4.0e-18
FL-Next: sp=Probable receptor protein kinase TMK1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
biog3_v1.0_unigene22300 biogeco3 v1.0 273
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene22338 biogeco3 v1.0 327
AutoFact: Putative truncated TIR-NBS-LRR protein n=1 Tax=Pinus monticola RepID=E9NZS7_PINMO 0.0
Blast2go: tir-nbs-lrr resistance protein 0.0
unknown
biog3_v1.0_unigene22386 biogeco3 v1.0 326
AutoFact: leucine-rich repeat-containing protein [Arabidopsis thaliana] gb|AAM74505.1| AT3g15410/MJK13_7 [Arabidopsis thaliana] gb|AAN46812.1| At3g15410/MJK13_7 [Arabidopsis thaliana] gb|AEE75670.1| leucine-rich repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=LRR repeats and ubiquitin-like domain-containing protein At2g30105; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: leucine-rich repeat-containing protein 0.0
Internal
biog3_v1.0_unigene22389 biogeco3 v1.0 353
AutoFact: F-box/LRR-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9STU0_RICCO 0.0
FL-Next: sp=F-box protein SKIP1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein skip1 0.0
Internal
biog3_v1.0_unigene22413 biogeco3 v1.0 163
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 9.70722e-22
Putative N-terminus
biog3_v1.0_unigene22440 biogeco3 v1.0 301
AutoFact: DNA-directed RNA polymerase n=37 Tax=Spermatophyta RepID=C5YGY9_SORBI 0.0
FL-Next: sp=DNA-directed RNA polymerase subunit beta'' 2; Cryptomeria japonica (Japanese cedar) (Cupressus japonica). Plastid; Chloroplast. 0.0
Internal
biog3_v1.0_unigene22459 biogeco3 v1.0 234
AutoFact: Clavata-like receptor n=1 Tax=Picea glauca RepID=Q19AV8_PICGL 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Internal
biog3_v1.0_unigene22476 biogeco3 v1.0 112
AutoFact: Receptor protein kinase-like protein n=1 Tax=Capsicum annuum RepID=Q8VZH5_CAPAN 0.0
FL-Next: sp=Receptor-like protein kinase FERONIA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: feronia receptor-like kinase 0.0
Internal
biog3_v1.0_unigene22478 biogeco3 v1.0 223
AutoFact: ABC transporter G family member 22 [Arabidopsis thaliana] ref|NP_850781.2| ABC transporter G family member 22 [Arabidopsis thaliana] sp|Q93YS4.1|AB22G_ARATH RecName: Full=ABC transporter G family member 22; Short=ABC transporter ABCG.22; Short=AtABCG22; A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 22-like 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain