Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Leucine-rich repeat

Term: IPR001611  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene7619 biogeco3 v1.0 1234
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 0.0
C-terminus
biog3_v1.0_unigene7657 biogeco3 v1.0 380
AutoFact: Putative receptor kinase n=1 Tax=Malus x domestica RepID=Q2LJM2_MALDO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat receptor-like protein kinase 0.0
Internal
biog3_v1.0_unigene7663 biogeco3 v1.0 1014
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RJL3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: leucine rich repeat family expressed 0.0
N-terminus
biog3_v1.0_unigene7708 biogeco3 v1.0 274
AutoFact: leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana] gb|AAC16742.1| Contains similarity to adenylate cyclase gb|AF012921 from Magnaporthe grisae. EST gb|Z24512 comes from this gene [Arabidopsis thaliana] gb|AAM20583.1| unknown protein [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g04210 0.0
Internal
biog3_v1.0_unigene7714 biogeco3 v1.0 414
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene7724 biogeco3 v1.0 278
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
Internal
biog3_v1.0_unigene7729 biogeco3 v1.0 316
AutoFact: Receptor protein kinase CLAVATA1, putative n=1 Tax=Ricinus communis RepID=B9T173_RICCO 0.0
FL-Next: sp=Receptor-like protein kinase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: receptor-like protein kinase 0.0
N-terminus
biog3_v1.0_unigene7828 biogeco3 v1.0 1152
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 0.0
N-terminus
biog3_v1.0_unigene7956 biogeco3 v1.0 357
AutoFact: LRR receptor-like serine/threonine-protein kinase RPK2 [Arabidopsis thaliana] sp|Q9S7I6.1|RPK2_ARATH RecName: Full=LRR receptor-like serine/threonine-protein kinase RPK2; AltName: Full=Protein TOADSTOOL 2; AltName: Full=Receptor-like protein kinase 2; Fla 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase rpk2 0.0
C-terminus
biog3_v1.0_unigene7994 biogeco3 v1.0 416
AutoFact: Leucine rich repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RTY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine rich repeat-containing 0.0
Internal
biog3_v1.0_unigene8003 biogeco3 v1.0 806
AutoFact: F-box/LRR-repeat protein 3 [Arabidopsis thaliana] sp|Q8RWU5.1|FBL3_ARATH RecName: Full=F-box/LRR-repeat protein 3 gb|AAM14053.1| putative F-box protein family, AtFBL3 [Arabidopsis thaliana] gb|AAM67471.1| putative F-box family protein AtFBL3 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene8116 biogeco3 v1.0 348
AutoFact: Serine/threonine-protein kinase PBS1, putative n=1 Tax=Ricinus communis RepID=B9S563_RICCO 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinase-like protein tmkl1-like 3.33653e-38
C-terminus
biog3_v1.0_unigene8213 biogeco3 v1.0 518
AutoFact: receptor kinase-like protein [Arabidopsis thaliana] emb|CAB80391.1| receptor kinase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable lrr receptor-like serine threonine-protein kinase at4g37250-like 0.0
Internal
biog3_v1.0_unigene8282 biogeco3 v1.0 489
AutoFact: putative receptor-like protein kinase 3 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable receptor-like protein kinase at5g18500-like 0.0
Internal
biog3_v1.0_unigene8337 biogeco3 v1.0 320
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9R831_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-threonine protein plant- 0.0
Internal
biog3_v1.0_unigene8341 biogeco3 v1.0 287
AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9RBB1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene8398 biogeco3 v1.0 174
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 0.0
Internal
biog3_v1.0_unigene8427 biogeco3 v1.0 346
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein Sb06g030295; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene8504 biogeco3 v1.0 525
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 0.0
C-terminus
biog3_v1.0_unigene8629 biogeco3 v1.0 212
AutoFact: lectin protein kinase-like protein [Arabidopsis thaliana] sp|Q9XID3.1|Y1343_ARATH RecName: Full=G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; Flags: Precursor gb|AAD39605.1|AC007454_4 Contains similarity to gi|479356 protein kin 0.0
Blast2go: protein 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain