Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: small nucleolar ribonucleoprotein complex

Term: GO:0005732  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene291 biogeco3 v1.0 654
• AutoFact: U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana] ref|NP_001031238.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana] gb|AAL50104.1| At1g65700/F1E22_3 [Arabidopsis thaliana] gb|AAM16215.1| At1g65700/F1E22_3 [Arabidopsis thali 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u6 snrna-associated sm-like protein lsm8 0.0
C-terminus
biog3_v1.0_unigene5210 biogeco3 v1.0 670
• AutoFact: small nuclear ribonucleoprotein, putative [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small nuclear ribonucleoprotein sm d3 0.0
Complete
biog3_v1.0_unigene7409 biogeco3 v1.0 306
• AutoFact: Sm-like protein [Arabidopsis thaliana] 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene8804 biogeco3 v1.0 292
• AutoFact: putative small nuclear ribonucleoprotein [Arabidopsis thaliana] ref|XP_002886267.1| hypothetical protein ARALYDRAFT_900374 [Arabidopsis lyrata subsp. lyrata] gb|AAD08943.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana] gb|AAM64436.1| p 3.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: small nuclear ribonucleoprotein e 0.0
N-terminus
biog3_v1.0_unigene13926 biogeco3 v1.0 331
• AutoFact: Sm-like protein [Arabidopsis thaliana] 2.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene20072 biogeco3 v1.0 219
• AutoFact: small nuclear ribonucleoprotein, putative [Arabidopsis thaliana] 0.0
• Blast2go: small nuclear ribonucleoprotein sm d3 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain