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Assembly Name: biogeco3 v1.0

Name: chromatin remodeling

Term: GO:0006338  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1119 biogeco3 v1.0 1142
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: dna topoisomerase 1 1.4013e-45
N-terminus
biog3_v1.0_unigene3562 biogeco3 v1.0 378
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SUQ2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: global transcription factor group 0.0
Internal
biog3_v1.0_unigene5199 biogeco3 v1.0 671
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SUQ2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: global transcription factor group 0.0
N-terminus
biog3_v1.0_unigene5284 biogeco3 v1.0 950
AutoFact: SNF5 homolog BSH [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin structure-remodeling complex protein bsh 0.0
Complete
biog3_v1.0_unigene5765 biogeco3 v1.0 506
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
Blast2go: dna topoisomerase 1 1.4013e-45
Coding
biog3_v1.0_unigene7850 biogeco3 v1.0 299
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase 1 1.4013e-45
Internal
biog3_v1.0_unigene18772 biogeco3 v1.0 403
AutoFact: probable histone deacetylase 19 [Zea mays] gb|AAP92528.1|AF322918_1 HDA1 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Internal
biog3_v1.0_unigene23063 biogeco3 v1.0 205
AutoFact: Actin related protein n=1 Tax=Populus trichocarpa RepID=B9IMW6_POPTR 2.0e-31
Blast2go: actin-related protein 6 2.8125e-36
unknown
biog3_v1.0_unigene24919 biogeco3 v1.0 231
AutoFact: probable histone deacetylase 19 [Zea mays] gb|AAP92528.1|AF322918_1 HDA1 [Zea mays] 0.0
FL-Next: sp=Histone deacetylase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain