Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: production of siRNA involved in RNA interference

Term: GO:0030422  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene19954 biogeco3 v1.0 270
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAD22300.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06492.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 1.72025e-30
Internal
biog3_v1.0_unigene22911 biogeco3 v1.0 319
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RGA8_RICCO 2.0e-22
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: the plant-specific rna polymerase iv largest subunit-like protein 3.12698e-22
Internal
biog3_v1.0_unigene22997 biogeco3 v1.0 305
AutoFact: RNA-dependent RNA polymerase 2 [Arabidopsis thaliana] sp|O82504.1|RDR2_ARATH RecName: Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2; AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1; AltName: Full=RNA-directed RNA polymerase 2 gb|AAC35535.1| simi 8.0e-20
Blast2go: rna-dependent rna polymerase 2 5.57959e-27
Putative coding
biog3_v1.0_unigene26174 biogeco3 v1.0 225
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAD22300.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06492.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] 1.0e-28
Blast2go: snf2 family dna-dependent atpase 1.72025e-30
unknown
biog3_v1.0_unigene26260 biogeco3 v1.0 289
AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: argonaute protein group 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain