Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: Group II intron splicing

Term: GO:0000373  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene393 biogeco3 v1.0 782
AutoFact: APO protein 1 [Arabidopsis thaliana] gb|AEE34293.1| APO protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apo protein 1 0.0
C-terminus
biog3_v1.0_unigene5967 biogeco3 v1.0 1910
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Internal
biog3_v1.0_unigene6917 biogeco3 v1.0 375
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
unknown
biog3_v1.0_unigene14386 biogeco3 v1.0 132
AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 0.0
Blast2go: chloroplastic group iia intron splicing facilitator crs1 0.0
unknown
biog3_v1.0_unigene15948 biogeco3 v1.0 210
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Putative coding
biog3_v1.0_unigene17929 biogeco3 v1.0 230
AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 0.0
Blast2go: chloroplastic group iia intron splicing facilitator crs1 0.0
unknown
biog3_v1.0_unigene19112 biogeco3 v1.0 263
AutoFact: CRS2-associated factor 2 [Arabidopsis thaliana] sp|Q9LDA9.1|CAF2P_ARATH RecName: Full=CRS2-associated factor 2, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2; Flags: Precursor gb|AAF79596.1|AC007 4.0e-17
FL-Next: sp=CRS2-associated factor 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: crs2-associated factor chloroplastic-like 5.47934e-23
Internal
biog3_v1.0_unigene19846 biogeco3 v1.0 276
AutoFact: CRS1_YhbY domain containing protein 3.0e-12
FL-Next: sp=CRS2-associated factor 1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: crs2-associated factor 1 1.7572e-31
Putative C-terminus
biog3_v1.0_unigene20759 biogeco3 v1.0 242
AutoFact: CRS2-associated factor 1, chloroplastic precursor [Zea mays] sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gb|AAP 4.0e-26
FL-Next: sp=CRS2-associated factor 1, chloroplastic; Zea mays (Maize). 0.0
Blast2go: crs2-associated factor 1 9.21957e-31
Internal
biog3_v1.0_unigene21518 biogeco3 v1.0 238
AutoFact: CRS2-associated factor 2, chloroplastic n=2 Tax=Arabidopsis RepID=CAF2P_ARATH 3.0e-39
FL-Next: sp=CRS2-associated factor 2, chloroplastic; Zea mays (Maize). 0.0
Blast2go: crs2-associated factor 2 0.0
Internal
biog3_v1.0_unigene21601 biogeco3 v1.0 293
AutoFact: CRM family member 2 [Arabidopsis thaliana] gb|AAM97013.1| unknown protein [Arabidopsis thaliana] gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana] gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana] 3.0e-36
Blast2go: chloroplastic group iia intron splicing facilitator chloroplastic-like 1.53877e-41
unknown
biog3_v1.0_unigene21978 biogeco3 v1.0 239
AutoFact: CRS2-associated factor 1 [Arabidopsis thaliana] sp|Q9SL79.2|CAF1P_ARATH RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gb|AAK76556.1| unkn 4.0e-25
FL-Next: sp=CRS2-associated factor 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: crs2-associated factor 1 1.06168e-31
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain