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Assembly Name: biogeco3 v1.0

Name: DNA topoisomerase (ATP-hydrolyzing).

Term: EC:5.99.1.3  Help

Source: EC from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene1031 biogeco3 v1.0 1617
• AutoFact: predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621F83 0.0
• FL-Next: sp=DNA topoisomerase 6 subunit A; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase 6 subunit a-like 0.0
Complete
biog3_v1.0_unigene1119 biogeco3 v1.0 1142
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
• FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
• Blast2go: dna topoisomerase 1 1.4013e-45
N-terminus
biog3_v1.0_unigene2931 biogeco3 v1.0 847
• AutoFact: putative topoisomerase VI subunit B [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase 6 subunit b 0.0
Internal
biog3_v1.0_unigene5765 biogeco3 v1.0 506
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
• Blast2go: dna topoisomerase 1 1.4013e-45
Coding
biog3_v1.0_unigene5888 biogeco3 v1.0 921
• AutoFact: putative topoisomerase VI subunit B [Oryza sativa Indica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase 6 subunit b 0.0
C-terminus
biog3_v1.0_unigene7850 biogeco3 v1.0 299
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
• FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase 1 1.4013e-45
Internal
biog3_v1.0_unigene9807 biogeco3 v1.0 811
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 0.0
• FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana. 0.0
• Blast2go: dna gyrase subunit a 0.0
Internal
biog3_v1.0_unigene10838 biogeco3 v1.0 468
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
biog3_v1.0_unigene11047 biogeco3 v1.0 819
• AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene12018 biogeco3 v1.0 526
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
biog3_v1.0_unigene13557 biogeco3 v1.0 446
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna gyrase subunit a 0.0
N-terminus
biog3_v1.0_unigene13991 biogeco3 v1.0 454
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna gyrase subunit a 0.0
C-terminus
biog3_v1.0_unigene15336 biogeco3 v1.0 379
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
biog3_v1.0_unigene15689 biogeco3 v1.0 295
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
biog3_v1.0_unigene16313 biogeco3 v1.0 79
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 2; Pisum sativum (Garden pea). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
biog3_v1.0_unigene19754 biogeco3 v1.0 304
• AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna gyrase subunit b 0.0
Internal
biog3_v1.0_unigene20010 biogeco3 v1.0 200
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna topoisomerase ii 0.0
N-terminus
biog3_v1.0_unigene22347 biogeco3 v1.0 308
• AutoFact: predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621F83 0.0
• Blast2go: dna topoisomerase 6 subunit a-like 0.0
unknown
biog3_v1.0_unigene25615 biogeco3 v1.0 147
• AutoFact: DNA topoisomerase 2 (Fragment) n=1 Tax=Vitis vinifera RepID=D7T341_VITVI 0.0
• FL-Next: sp=DNA topoisomerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna topoisomerase ii 0.0
Internal
biog3_v1.0_unigene25732 biogeco3 v1.0 378
• AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna gyrase subunit b 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain