Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: small-subunit processome

Term: GO:0032040  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene4228 biogeco3 v1.0 209
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
• Blast2go: transducin beta-like protein 3-like 0.0
unknown
biog3_v1.0_unigene6957 biogeco3 v1.0 471
• AutoFact: TerC integral membrane domain-containing protein [Arabidopsis thaliana] gb|AED91766.1| TerC integral membrane domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: uncharacterized membrane protein stkorf319-like 0.0
Internal
biog3_v1.0_unigene8256 biogeco3 v1.0 510
• AutoFact: U3 ribonucleoprotein-like protein [Arabidopsis thaliana] gb|AEE82164.1| U3 ribonucleoprotein-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: u3 ribonucleoprotein family protein 0.0
Internal
biog3_v1.0_unigene8750 biogeco3 v1.0 329
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
• Blast2go: transducin beta-like protein 3-like 0.0
Coding
biog3_v1.0_unigene10196 biogeco3 v1.0 305
• AutoFact: similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana] 0.0
• Blast2go: wd-repeat membrane protein 0.0
unknown
biog3_v1.0_unigene13489 biogeco3 v1.0 586
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Flagellar WD repeat-containing protein Pf20; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Blast2go: transducin beta-like protein 3-like 0.0
Internal
biog3_v1.0_unigene14174 biogeco3 v1.0 418
• AutoFact: TerC integral membrane domain-containing protein [Arabidopsis thaliana] gb|AED91766.1| TerC integral membrane domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: uncharacterized membrane protein stkorf319-like 0.0
C-terminus
biog3_v1.0_unigene20739 biogeco3 v1.0 342
• AutoFact: similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Os02g0513700 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: wd-repeat membrane protein 0.0
Internal
biog3_v1.0_unigene20836 biogeco3 v1.0 146
• AutoFact: similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana] 0.0
• Blast2go: wd-repeat membrane protein 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain