Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: secondary cell wall biogenesis

Term: GO:0009834  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene738 biogeco3 v1.0 540
• AutoFact: nucleotide-diphospho-sugar transferase domain-containing protein [Arabidopsis thaliana] ref|NP_564290.2| nucleotide-diphospho-sugar transferase domain-containing protein [Arabidopsis thaliana] sp|Q9SXC4.2|IRX9H_ARATH RecName: Full=Probable beta-1,4-xylosy 0.0
• FL-Next: sp=Probable beta-1,4-xylosyltransferase IRX9; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: beta- - 0.0
Putative N-terminus
biog3_v1.0_unigene5131 biogeco3 v1.0 424
• AutoFact: Auxin-induced protein 5NG4 n=1 Tax=Pinus taeda RepID=5NG4_PINTA 0.0
• FL-Next: sp=Auxin-induced protein 5NG4; Pinus taeda (Loblolly pine). 0.0
• Blast2go: auxin-induced protein 5ng4-like 0.0
C-terminus
biog3_v1.0_unigene5665 biogeco3 v1.0 541
• AutoFact: nucleotide-diphospho-sugar transferase domain-containing protein [Arabidopsis thaliana] ref|NP_564290.2| nucleotide-diphospho-sugar transferase domain-containing protein [Arabidopsis thaliana] sp|Q9SXC4.2|IRX9H_ARATH RecName: Full=Probable beta-1,4-xylosy 0.0
• Blast2go: beta- - 0.0
unknown
biog3_v1.0_unigene7971 biogeco3 v1.0 940
• AutoFact: glycoprotein-specific UDP-glucuronyltransferase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Probable beta-1,4-xylosyltransferase IRX9H; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: glycosyltransferase irx9-like protein 0.0
N-terminus
biog3_v1.0_unigene7976 biogeco3 v1.0 528
• AutoFact: DUF579 domain containing protein 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene9157 biogeco3 v1.0 328
• AutoFact: small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis 3.0e-30
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: small nuclear ribonucleoprotein associated protein b 8.18162e-41
N-terminus
biog3_v1.0_unigene9877 biogeco3 v1.0 278
• AutoFact: Lustrin A-like n=4 Tax=Oryza sativa RepID=Q69T67_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lustrin a-like 0.0
Putative C-terminus
biog3_v1.0_unigene9912 biogeco3 v1.0 279
• AutoFact: Exostosin family protein [Arabidopsis thaliana] sp|Q940Q8.1|IX10L_ARATH RecName: Full=Probable beta-1,4-xylosyltransferase IRX10L; AltName: Full=Glucuronoxylan glucuronosyltransferase 1; Short=AtGUT1; AltName: Full=Glucuronoxylan glucuronosyltransferase 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable beta- -xylosyltransferase irx10l-like 0.0
C-terminus
biog3_v1.0_unigene11291 biogeco3 v1.0 524
• AutoFact: Exostosin family protein [Arabidopsis thaliana] sp|Q940Q8.1|IX10L_ARATH RecName: Full=Probable beta-1,4-xylosyltransferase IRX10L; AltName: Full=Glucuronoxylan glucuronosyltransferase 1; Short=AtGUT1; AltName: Full=Glucuronoxylan glucuronosyltransferase 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable beta- -xylosyltransferase irx10l-like 0.0
Internal
biog3_v1.0_unigene17566 biogeco3 v1.0 239
• AutoFact: Auxin-induced protein 5NG4 n=1 Tax=Pinus taeda RepID=5NG4_PINTA 0.0
• FL-Next: sp=Auxin-induced protein 5NG4; Pinus taeda (Loblolly pine). 0.0
• Blast2go: auxin-induced protein 5ng4-like 0.0
Internal
biog3_v1.0_unigene18666 biogeco3 v1.0 141
• AutoFact: small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis 3.0e-30
• Blast2go: small nuclear ribonucleoprotein associated protein b 8.18162e-41
unknown
biog3_v1.0_unigene20388 biogeco3 v1.0 346
• AutoFact: Lustrin A-like n=4 Tax=Oryza sativa RepID=Q69T67_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lustrin a-like 0.0
Internal
biog3_v1.0_unigene20462 biogeco3 v1.0 394
• AutoFact: Laccase n=1 Tax=Pinus taeda RepID=Q9AUH9_PINTA 3.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: diphenol oxidase 1.82169e-44
C-terminus
biog3_v1.0_unigene21503 biogeco3 v1.0 383
• AutoFact: DUF579 domain containing protein 1.0e-26
• Blast2go: protein 0.0
Putative coding
biog3_v1.0_unigene22156 biogeco3 v1.0 299
• AutoFact: Exostosin family protein [Arabidopsis thaliana] sp|Q940Q8.1|IX10L_ARATH RecName: Full=Probable beta-1,4-xylosyltransferase IRX10L; AltName: Full=Glucuronoxylan glucuronosyltransferase 1; Short=AtGUT1; AltName: Full=Glucuronoxylan glucuronosyltransferase 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable beta- -xylosyltransferase irx10l-like 0.0
Internal
biog3_v1.0_unigene22406 biogeco3 v1.0 417
• AutoFact: DUF579 domain containing protein 1.0e-26
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene22604 biogeco3 v1.0 273
• AutoFact: glycoprotein-specific UDP-glucuronyltransferase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Probable beta-1,4-xylosyltransferase IRX9H; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: glycosyltransferase irx9-like protein 0.0
Internal
biog3_v1.0_unigene23294 biogeco3 v1.0 156
• AutoFact: glycoprotein-specific UDP-glucuronyltransferase-like protein [Arabidopsis thaliana] 0.0
• Blast2go: glycosyltransferase irx9-like protein 0.0
unknown
biog3_v1.0_unigene24604 biogeco3 v1.0 258
• AutoFact: nucleotide-diphospho-sugar transferase domain-containing protein [Arabidopsis thaliana] ref|NP_564290.2| nucleotide-diphospho-sugar transferase domain-containing protein [Arabidopsis thaliana] sp|Q9SXC4.2|IRX9H_ARATH RecName: Full=Probable beta-1,4-xylosy 0.0
• FL-Next: sp=Probable beta-1,4-xylosyltransferase IRX9H; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: beta- - 0.0
Internal
biog3_v1.0_unigene25542 biogeco3 v1.0 261
• AutoFact: transferase, putative 0.0
• FL-Next: sp=Probable glucuronoxylan glucuronosyltransferase IRX7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable glucuronoxylan glucuronosyltransferase irx7-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain