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Assembly Name: biogeco3 v1.0

Name: COPI vesicle coat

Term: GO:0030126  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene1292 biogeco3 v1.0 641
• AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coatomer subunit beta-1 0.0
Internal
biog3_v1.0_unigene2559 biogeco3 v1.0 870
• AutoFact: SYS1 domain containing protein 1.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coatomer subunit beta -1 0.0
Putative Complete
biog3_v1.0_unigene6061 biogeco3 v1.0 2658
• AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 0.0
• FL-Next: sp=Coatomer subunit gamma-2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: coatomer subunit gamma 0.0
C-terminus
biog3_v1.0_unigene7295 biogeco3 v1.0 521
• AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
• FL-Next: sp=Coatomer subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: coatomer alpha 0.0
C-terminus
biog3_v1.0_unigene20123 biogeco3 v1.0 223
• AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
• Blast2go: coatomer alpha 0.0
Putative coding
biog3_v1.0_unigene23196 biogeco3 v1.0 257
• AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coatomer subunit beta-1 0.0
Internal
biog3_v1.0_unigene24086 biogeco3 v1.0 265
• AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 0.0
• FL-Next: sp=Coatomer subunit gamma; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: coatomer subunit gamma 0.0
N-terminus
biog3_v1.0_unigene25734 biogeco3 v1.0 467
• AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coatomer subunit beta-1 0.0
C-terminus
biog3_v1.0_unigene25755 biogeco3 v1.0 423
• AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
• FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: coatomer alpha 0.0
Internal
biog3_v1.0_unigene26182 biogeco3 v1.0 279
• AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
• FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: coatomer alpha 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain