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Assembly Name: biogeco3 v1.0

Name: poly(U) RNA binding

Term: GO:0008266  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2656 biogeco3 v1.0 265
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
Blast2go: 33 kda chloroplastic-like 0.0
unknown
biog3_v1.0_unigene2718 biogeco3 v1.0 377
AutoFact: protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] ref|NP_849390.1| protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] sp|Q8RW96.2|2A5G_ARATH RecName: Full=Serine/threonine protein phosphatase 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4552 biogeco3 v1.0 812
AutoFact: RecName: Full=50S ribosomal protein L4, chloroplastic; Short=R-protein L4; Flags: Precursor pdb|3BBO|G Chain G, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome emb|CAA75149.1| chloroplast ribosom 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l4 0.0
C-terminus
biog3_v1.0_unigene6026 biogeco3 v1.0 1474
AutoFact: [R] COG2605 Predicted kinase related to galactokinase and mevalonate kinase 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ghmp kinase family protein 0.0
Complete
biog3_v1.0_unigene6824 biogeco3 v1.0 1582
AutoFact: mRNA-binding protein precursor [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna binding protein precursor-like 0.0
Complete
biog3_v1.0_unigene7060 biogeco3 v1.0 1425
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 33 kda chloroplastic-like 0.0
Complete
biog3_v1.0_unigene8377 biogeco3 v1.0 1452
AutoFact: ferredoxin-NADP+ reductase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferredoxin-nadp+ reductase 0.0
Complete
biog3_v1.0_unigene11466 biogeco3 v1.0 1570
AutoFact: hydroxypyruvate reductase [Bruguiera gymnorhiza] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydroxypyruvate reductase 0.0
Complete
biog3_v1.0_unigene11470 biogeco3 v1.0 1328
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
biog3_v1.0_unigene12061 biogeco3 v1.0 1897
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Complete
biog3_v1.0_unigene15220 biogeco3 v1.0 275
AutoFact: protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] ref|NP_849390.1| protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] sp|Q8RW96.2|2A5G_ARATH RecName: Full=Serine/threonine protein phosphatase 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene15916 biogeco3 v1.0 237
AutoFact: RecName: Full=50S ribosomal protein L4, chloroplastic; Short=R-protein L4; Flags: Precursor pdb|3BBO|G Chain G, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome emb|CAA75149.1| chloroplast ribosom 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l4 0.0
N-terminus
biog3_v1.0_unigene22036 biogeco3 v1.0 356
AutoFact: protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] ref|NP_849390.1| protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] sp|Q8RW96.2|2A5G_ARATH RecName: Full=Serine/threonine protein phosphatase 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene23715 biogeco3 v1.0 201
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
Blast2go: 33 kda chloroplastic-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain