Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: transcription initiation, DNA-dependent

Term: GO:0006352  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene4361 biogeco3 v1.0 635
AutoFact: TBP-associated factor 13 n=1 Tax=Solanum melongena RepID=F4YY46_SOLME 0.0
FL-Next: tr=TBP-associated factor 13; Solanum melongena (Eggplant) (Aubergine). 0.0
Blast2go: transcription factor tfiid 0.0
Putative Complete
biog3_v1.0_unigene4677 biogeco3 v1.0 492
AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
FL-Next: tr=F28G4.8 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription initiation factor tfiid subunit a 4.14924e-42
Internal
biog3_v1.0_unigene4731 biogeco3 v1.0 411
AutoFact: RecName: Full=Acetylornithine aminotransferase, mitochondrial; Short=ACOAT; AltName: Full=Acetylornithine transaminase; Short=AOTA; Flags: Precursor emb|CAA69936.1| acetylornithine aminotransferase [Alnus glutinosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene5656 biogeco3 v1.0 423
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase ht1-like 0.0
N-terminus
biog3_v1.0_unigene5782 biogeco3 v1.0 438
AutoFact: RecName: Full=Acetylornithine aminotransferase, mitochondrial; Short=ACOAT; AltName: Full=Acetylornithine transaminase; Short=AOTA; Flags: Precursor emb|CAA69936.1| acetylornithine aminotransferase [Alnus glutinosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene5915 biogeco3 v1.0 676
AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna sigma 70 subfamily 0.0
N-terminus
biog3_v1.0_unigene6755 biogeco3 v1.0 287
AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
Blast2go: at4g04770 t4b21_16 0.0
unknown
biog3_v1.0_unigene8389 biogeco3 v1.0 347
AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transcription initiation factor tfiid subunit a 4.14924e-42
Internal
biog3_v1.0_unigene9140 biogeco3 v1.0 220
AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
Blast2go: rna sigma 70 subfamily 0.0
unknown
biog3_v1.0_unigene10699 biogeco3 v1.0 1630
AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g04770 t4b21_16 0.0
C-terminus
biog3_v1.0_unigene10774 biogeco3 v1.0 452
AutoFact: RecName: Full=Acetylornithine aminotransferase, mitochondrial; Short=ACOAT; AltName: Full=Acetylornithine transaminase; Short=AOTA; Flags: Precursor emb|CAA69936.1| acetylornithine aminotransferase [Alnus glutinosa] 0.0
FL-Next: tr=Ornithine aminotransferase; Pinus sylvestris (Scots pine). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene11276 biogeco3 v1.0 845
AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna sigma 70 subfamily 0.0
Putative C-terminus
biog3_v1.0_unigene12015 biogeco3 v1.0 691
AutoFact: transcription initiation factor TFIID subunit D7 [Arabidopsis thaliana] gb|AAD25788.1|AC006577_24 Similar to gb|U21858 transcription initiation factor TFIID 31KD subunit (TAFII32) from Homo sapiens [Arabidopsis thaliana] gb|AAF65406.1|AF238327_1 putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor tfiid subunit 0.0
C-terminus
biog3_v1.0_unigene14945 biogeco3 v1.0 222
AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna sigma 70 subfamily 0.0
Internal
biog3_v1.0_unigene20030 biogeco3 v1.0 375
AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
Blast2go: transcription initiation factor tfiid subunit a 4.14924e-42
Putative coding
biog3_v1.0_unigene20073 biogeco3 v1.0 313
AutoFact: Plastid sigma facor SIG2 n=2 Tax=Physcomitrella patens RepID=E1C9M6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna sigma 70 subfamily 0.0
Internal
biog3_v1.0_unigene21850 biogeco3 v1.0 245
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene23466 biogeco3 v1.0 276
AutoFact: SWIB/MDM2 and Plus-3 and GYF domain-containing protein [Arabidopsis thaliana] sp|Q9FT92.2|Y5843_ARATH RecName: Full=Uncharacterized protein At5g08430 gb|ACF06124.1| At5g08430 [Arabidopsis thaliana] gb|AED91300.1| SWIB/MDM2 and Plus-3 and GYF domain-contai 1.0e-31
FL-Next: sp=Zinc finger CCCH domain-containing protein 44; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 44-like 0.0
Internal
biog3_v1.0_unigene23712 biogeco3 v1.0 371
AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase ht1-like 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain