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Assembly Name: biogeco3 v1.0

Name: Ligases, Forming carbon-nitrogen bonds, Acid--D-amino-acid ligases (peptide synthases).

Term: EC:6.3.2.-  Help

Source: EC from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene584 biogeco3 v1.0 387
• AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Internal
biog3_v1.0_unigene1724 biogeco3 v1.0 345
• AutoFact: putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] dbj|BAD08189.1| putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl3-like 0.0
Internal
biog3_v1.0_unigene1991 biogeco3 v1.0 227
• AutoFact: putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] dbj|BAD08189.1| putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl3-like 0.0
C-terminus
biog3_v1.0_unigene2048 biogeco3 v1.0 370
• AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Internal
biog3_v1.0_unigene2253 biogeco3 v1.0 1616
• AutoFact: ubiquitin-activating enzyme E1 C [Arabidopsis thaliana] sp|O65041.2|UBA3_ARATH RecName: Full=NEDD8-activating enzyme E1 catalytic subunit; AltName: Full=RUB-activating enzyme; AltName: Full=Ubiquitin-activating enzyme E1-like protein gb|AAK91442.1| AT5g19 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nedd8-activating enzyme e1 catalytic subunit 0.0
Complete
biog3_v1.0_unigene3374 biogeco3 v1.0 456
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKH9_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-conjugating enzyme e2 0.0
C-terminus
biog3_v1.0_unigene3500 biogeco3 v1.0 292
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKH9_PICSI 0.0
• Blast2go: ubiquitin-conjugating enzyme e2 0.0
unknown
biog3_v1.0_unigene3873 biogeco3 v1.0 1057
• AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LMJ5_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-conjugating enzyme 0.0
Complete
biog3_v1.0_unigene3882 biogeco3 v1.0 638
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=D5AE25_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-conjugating enzyme 0.0
Complete
biog3_v1.0_unigene4072 biogeco3 v1.0 551
• AutoFact: pfam12483, GIDE, E3 Ubiquitin ligase 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mitochondrial ubiquitin ligase activator of nfkb 1-like 0.0
Putative C-terminus
biog3_v1.0_unigene4782 biogeco3 v1.0 412
• AutoFact: HECT E3 ubiquitin ligase, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0NZ85_PHYIT 3.0e-28
• FL-Next: sp=E3 ubiquitin-protein ligase UPL2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: hect e3 ubiquitin ligase 0.0
Internal
biog3_v1.0_unigene5668 biogeco3 v1.0 344
• AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LR70_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-conjugating enzyme e2 0.0
N-terminus
biog3_v1.0_unigene6971 biogeco3 v1.0 326
• AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Internal
biog3_v1.0_unigene7433 biogeco3 v1.0 261
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKP2_PICSI 0.0
• Blast2go: ubiquitin-conjugating enzyme e2-18 0.0
unknown
biog3_v1.0_unigene8729 biogeco3 v1.0 402
• AutoFact: Ubiquitin-conjugating enzyme E2 n=2 Tax=Pinaceae RepID=Q9ZRS7_PSEMZ 0.0
• FL-Next: tr=Ubiquitin-conjugating enzyme E2; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
• Blast2go: ubiquitin-conjugating enzyme e2-18 0.0
Putative Complete
biog3_v1.0_unigene11246 biogeco3 v1.0 649
• AutoFact: Ubiquitin carrier protein (Fragment) n=21 Tax=Spermatophyta RepID=D7SVT3_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-conjugating enzyme e2 i 0.0
Complete
biog3_v1.0_unigene12315 biogeco3 v1.0 393
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKP2_PICSI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-conjugating enzyme e2-18 0.0
C-terminus
biog3_v1.0_unigene14602 biogeco3 v1.0 319
• AutoFact: Ubiquitin carrier protein (Fragment) n=21 Tax=Spermatophyta RepID=D7SVT3_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-conjugating enzyme e2 i 0.0
C-terminus
biog3_v1.0_unigene15728 biogeco3 v1.0 212
• AutoFact: Ubiquitin carrier protein n=2 Tax=Picea sitchensis RepID=B8LR70_PICSI 0.0
• Blast2go: ubiquitin-conjugating enzyme e2 0.0
unknown
biog3_v1.0_unigene15763 biogeco3 v1.0 311
• AutoFact: Ubiquitin carrier protein n=1 Tax=Picea sitchensis RepID=A9NKP2_PICSI 0.0
• Blast2go: ubiquitin-conjugating enzyme e2-18 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain