Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: 7S RNA binding

Term: GO:0008312  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene1202 biogeco3 v1.0 1187
• AutoFact: signal recognition particle subunit [Arabidopsis thaliana] sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic; Short=54 chloroplast protein; Short=54CP; Short=SRP54; AltName: Full=FFC; Flags: Precursor emb|CAA7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: signal recognition particle 54 kda chloroplastic-like 0.0
Internal
biog3_v1.0_unigene2558 biogeco3 v1.0 456
• AutoFact: signal recognition particle subunit SRP19 [Arabidopsis thaliana] sp|Q943Z6.1|SRP19_ARATH RecName: Full=Signal recognition particle 19 kDa protein; Short=SRP19 gb|AAL27515.1|AF439847_1 At1g48160/F21D18_11 [Arabidopsis thaliana] gb|AAM65885.1| signal recogn 8.00001e-41
• FL-Next: sp=Signal recognition particle 19 kDa protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: signal recognition particle 19 kda protein 0.0
Complete
biog3_v1.0_unigene5976 biogeco3 v1.0 1484
• AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: signal recognition particle 54 kda protein 3 0.0
C-terminus
biog3_v1.0_unigene13721 biogeco3 v1.0 187
• AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC 0.0
• FL-Next: sp=Signal recognition particle 54 kDa protein 2; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Blast2go: signal recognition particle 54 kda protein 3 0.0
Putative N-terminus
biog3_v1.0_unigene25522 biogeco3 v1.0 559
• AutoFact: signal recognition particle subunit [Arabidopsis thaliana] sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic; Short=54 chloroplast protein; Short=54CP; Short=SRP54; AltName: Full=FFC; Flags: Precursor emb|CAA7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: signal recognition particle 54 kda chloroplastic-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain