Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: double-strand break repair

Term: GO:0006302  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene2302 biogeco3 v1.0 321
• AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 0.0
• FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: dna ligase 0.0
Internal
biog3_v1.0_unigene6998 biogeco3 v1.0 685
• AutoFact: ATP-dependent DNA helicase 2 subunit KU80 [Arabidopsis thaliana] sp|Q9FQ09.1|KU80_ARATH RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subun 1.0e-30
• FL-Next: sp=ATP-dependent DNA helicase 2 subunit KU80; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: atp-dependent dna helicase 2 subunit ku80-like 0.0
Internal
biog3_v1.0_unigene14296 biogeco3 v1.0 362
• AutoFact: meiotic nuclear division protein 1-like protein [Arabidopsis thaliana] sp|Q8GYD2.1|MND1_ARATH RecName: Full=Meiotic nuclear division protein 1 homolog; Short=AtMND1; AltName: Full=Meiotic nuclear division 1-like protein dbj|BAC42364.1| unknown protein [Ar 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: meiotic nuclear division protein 1 homolog 0.0
C-terminus
biog3_v1.0_unigene19142 biogeco3 v1.0 393
• AutoFact: DNA repair protein RAD50 [Arabidopsis thaliana] sp|Q9SL02.2|RAD50_ARATH RecName: Full=DNA repair protein RAD50; Short=AtRAD50 gb|AAF36810.1|AF168748_1 DNA repair-recombination protein [Arabidopsis thaliana] gb|AAD15407.2| putative RAD50 DNA repair protein 0.0
• FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna repair protein rad50 0.0
C-terminus
biog3_v1.0_unigene19424 biogeco3 v1.0 227
• AutoFact: Sister chromatid cohesion 1 protein 2 n=4 Tax=Arabidopsis RepID=SCC12_ARATH 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: sister chromatid cohesion 1 protein 2 0.0
Internal
biog3_v1.0_unigene19620 biogeco3 v1.0 351
• AutoFact: ATP-dependent DNA helicase 2 subunit KU80 [Arabidopsis thaliana] sp|Q9FQ09.1|KU80_ARATH RecName: Full=ATP-dependent DNA helicase 2 subunit KU80; AltName: Full=ATP-dependent DNA helicase 2 subunit 2; AltName: Full=ATP-dependent DNA helicase II 80 kDa subun 1.0e-30
• Blast2go: atp-dependent dna helicase 2 subunit ku80-like 0.0
unknown
biog3_v1.0_unigene22122 biogeco3 v1.0 207
• AutoFact: DNA repair protein Rad50 n=8 Tax=Triticeae RepID=A8IE00_TRIMO 0.0
• FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna repair protein rad50 0.0
Internal
biog3_v1.0_unigene22663 biogeco3 v1.0 377
• AutoFact: DNA repair protein Rad50 n=8 Tax=Triticeae RepID=A8IE00_TRIMO 0.0
• FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna repair protein rad50 0.0
Internal
biog3_v1.0_unigene23601 biogeco3 v1.0 311
• AutoFact: DNA repair protein RAD50, putative n=1 Tax=Ricinus communis RepID=B9S9Y8_RICCO 0.0
• FL-Next: sp=DNA repair protein RAD50; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna repair protein rad50 0.0
N-terminus
biog3_v1.0_unigene23716 biogeco3 v1.0 241
• AutoFact: DNA ligase n=1 Tax=Populus trichocarpa RepID=B9IN68_POPTR 7.0e-26
• FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna ligase 5.58879e-30
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain