|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene2617
|
biogeco3 v1.0
|
551
|
|
• AutoFact: putative thioredoxin [Solanum lycopersicum]
|
2.0e-26
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
5.46815e-33
|
|
C-terminus
|
|
biog3_v1.0_unigene6213
|
biogeco3 v1.0
|
1402
|
|
• AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI
|
0.0
|
|
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: elongation factor chloroplastic-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene6678
|
biogeco3 v1.0
|
399
|
|
• AutoFact: 50S ribosomal protein L29 [Arabidopsis thaliana] sp|Q9FJP3.1|RK29_ARATH RecName: Full=50S ribosomal protein L29, chloroplastic; AltName: Full=CL29; Flags: Precursor pdb|3BBO|Z Chain Z, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a
|
3.0e-36
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 50s ribosomal protein l29
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene6804
|
biogeco3 v1.0
|
457
|
|
• AutoFact: 50S ribosomal protein L29 [Arabidopsis thaliana] sp|Q9FJP3.1|RK29_ARATH RecName: Full=50S ribosomal protein L29, chloroplastic; AltName: Full=CL29; Flags: Precursor pdb|3BBO|Z Chain Z, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a
|
3.0e-36
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 50s ribosomal protein l29
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene7188
|
biogeco3 v1.0
|
587
|
|
• AutoFact: UDP-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase, putative n=1 Tax=Ricinus communis RepID=B9RCC8_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: udp-n-acetylmuramoyl-l-alanyl-d-glutamate-- -diaminopimelate ligase-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene9807
|
biogeco3 v1.0
|
811
|
|
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62
|
0.0
|
|
• FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana.
|
0.0
|
|
• Blast2go: dna gyrase subunit a
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene13557
|
biogeco3 v1.0
|
446
|
|
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna gyrase subunit a
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene13991
|
biogeco3 v1.0
|
454
|
|
• AutoFact: PREDICTED: similar to DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Vitis vinifera RepID=UPI0001985B62
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna gyrase subunit a
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene15155
|
biogeco3 v1.0
|
433
|
|
• AutoFact: Superoxide dismutase n=1 Tax=Ginkgo biloba RepID=B8YNX9_GINBI
|
0.0
|
|
• Blast2go: chloroplast iron superoxide dismutase
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene17902
|
biogeco3 v1.0
|
246
|
|
• AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE
|
0.0
|
|
• FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana.
|
0.0
|
|
• Blast2go: dna gyrase subunit a
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene19550
|
biogeco3 v1.0
|
329
|
|
• AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI
|
0.0
|
|
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: elongation factor chloroplastic-like
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene19754
|
biogeco3 v1.0
|
304
|
|
• AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna gyrase subunit b
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20225
|
biogeco3 v1.0
|
250
|
|
• AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE
|
0.0
|
|
• FL-Next: sp=DNA gyrase subunit A, chloroplastic/mitochondrial; Nicotiana benthamiana.
|
0.0
|
|
• Blast2go: dna gyrase subunit a
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene21483
|
biogeco3 v1.0
|
308
|
|
• AutoFact: DNA gyrase subunit A, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRA_NICBE
|
0.0
|
|
• Blast2go: dna gyrase subunit a
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene22023
|
biogeco3 v1.0
|
205
|
|
• AutoFact: plastid transcriptionally active 15 protein [Arabidopsis thaliana] dbj|BAB11580.1| unnamed protein product [Arabidopsis thaliana] gb|AAL91232.1| unknown protein [Arabidopsis thaliana] gb|AAN15573.1| unknown protein [Arabidopsis thaliana] gb|AED96463.1| pl
|
2.0e-24
|
|
• Blast2go: protein
|
1.82729e-42
|
|
Coding
|
|
biog3_v1.0_unigene22732
|
biogeco3 v1.0
|
351
|
|
• AutoFact: Elongation factor Tu n=4 Tax=Oryza sativa RepID=Q6ZI53_ORYSJ
|
0.0
|
|
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: elongation factor tu
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene22983
|
biogeco3 v1.0
|
299
|
|
• AutoFact: putative UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; 54319-51679 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: udp-n-acetylmuramoyl-l-alanyl-d-glutamate-- -diaminopimelate ligase-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene24109
|
biogeco3 v1.0
|
225
|
|
• AutoFact: UDP-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase, putative n=1 Tax=Ricinus communis RepID=B9RCC8_RICCO
|
0.0
|
|
• FL-Next: tr=Putative UDP-N-acetylmuranoylanalyl-D-2-6-diaminoligase; Raphanus sativus (Radish).
|
0.0
|
|
• Blast2go: udp-n-acetylmuramoyl-l-alanyl-d-glutamate-- -diaminopimelate ligase-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene24807
|
biogeco3 v1.0
|
657
|
|
• AutoFact: 50S ribosomal protein L12, chloroplastic n=2 Tax=Spinacia oleracea RepID=RK12_SPIOL
|
1.0e-20
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ribosomal protein l12
|
1.4013e-45
|
|
Complete
|
|
biog3_v1.0_unigene25732
|
biogeco3 v1.0
|
378
|
|
• AutoFact: DNA gyrase subunit B, chloroplastic/mitochondrial n=1 Tax=Nicotiana benthamiana RepID=GYRB_NICBE
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna gyrase subunit b
|
0.0
|
|
Internal
|
