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Assembly Name: biogeco3 v1.0

Name: regulation of seed germination

Term: GO:0010029  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2207 biogeco3 v1.0 332
AutoFact: zf-UBR domain containing protein 8.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene3337 biogeco3 v1.0 578
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
FL-Next: tr=Brca1-associated protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: brca1-associated protein 0.0
Putative C-terminus
biog3_v1.0_unigene3982 biogeco3 v1.0 489
AutoFact: Outward-rectifying potassium channel KCO1 n=1 Tax=Eucalyptus camaldulensis RepID=Q9LLM5_EUCCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: outward rectifying potassium channel 0.0
Internal
biog3_v1.0_unigene15094 biogeco3 v1.0 190
AutoFact: zf-UBR domain containing protein 8.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene16955 biogeco3 v1.0 152
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-07
Blast2go: peptidyl-prolyl cis-trans isomerase e 0.0
unknown
biog3_v1.0_unigene17264 biogeco3 v1.0 205
AutoFact: zf-UBR domain containing protein 8.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene18010 biogeco3 v1.0 180
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein Sb03g006120; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene18089 biogeco3 v1.0 271
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: brca1-associated protein 0.0
Internal
biog3_v1.0_unigene18286 biogeco3 v1.0 184
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene18760 biogeco3 v1.0 346
AutoFact: Outward-rectifying potassium channel KCO1 n=1 Tax=Eucalyptus camaldulensis RepID=Q9LLM5_EUCCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: outward rectifying potassium channel 0.0
C-terminus
biog3_v1.0_unigene21559 biogeco3 v1.0 423
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: sp=Histidine kinase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histidine kinase 0.0
Internal
biog3_v1.0_unigene22090 biogeco3 v1.0 179
AutoFact: Arginyl-tRNA--protein transferase 1 n=1 Tax=Ricinus communis RepID=B9SLM9_RICCO 0.0
FL-Next: sp=Arginyl-tRNA--protein transferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: arginyl-trna--protein transferase 1-like 0.0
Internal
biog3_v1.0_unigene22705 biogeco3 v1.0 330
AutoFact: zf-UBR domain containing protein 8.0e-29
FL-Next: tr=Ubiquitin-protein ligase E3-alpha-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23226 biogeco3 v1.0 182
AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
FL-Next: sp=Histidine kinase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histidine kinase 0.0
Internal
biog3_v1.0_unigene25611 biogeco3 v1.0 444
AutoFact: thiamin pyrophosphokinase1 [Arabidopsis thaliana] gb|AAL25560.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AAM26660.1| At1g02880/F22D16_33 [Arabidopsis thaliana] gb|AEE27488.1| thiamin pyrophosphokinase1 [Arabidopsis thaliana] 4.99997e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thiamin pyrophosphokinase1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain