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Assembly Name: biogeco3 v1.0

Name: lysine biosynthetic process via diaminopimelate

Term: GO:0009089  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene2850 biogeco3 v1.0 522
• AutoFact: ADP-ribosylation factor GTPase-activating protein AGD4 n=2 Tax=Arabidopsis RepID=AGD4_ARATH 2.0e-29
• Blast2go: arf-gap domain 4 2.44904e-38
unknown
biog3_v1.0_unigene3120 biogeco3 v1.0 1131
• AutoFact: Diaminopimelate epimerase, chloroplastic n=2 Tax=Oryza sativa RepID=DAPF_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: diaminopimelate epimerase 0.0
C-terminus
biog3_v1.0_unigene6962 biogeco3 v1.0 577
• AutoFact: LL-diaminopimelate aminotransferase, chloroplastic n=3 Tax=Brassicaceae RepID=DAPAT_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ll-diaminopimelate aminotransferase 0.0
Putative C-terminus
biog3_v1.0_unigene7644 biogeco3 v1.0 403
• AutoFact: LL-diaminopimelate aminotransferase, chloroplastic n=3 Tax=Brassicaceae RepID=DAPAT_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ll-diaminopimelate aminotransferase 0.0
N-terminus
biog3_v1.0_unigene13790 biogeco3 v1.0 253
• AutoFact: LL-diaminopimelate aminotransferase, chloroplastic n=3 Tax=Brassicaceae RepID=DAPAT_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ll-diaminopimelate aminotransferase 0.0
Internal
biog3_v1.0_unigene15193 biogeco3 v1.0 515
• AutoFact: Diaminopimelate decarboxylase, putative n=1 Tax=Ricinus communis RepID=B9RH82_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: diaminopimelate decarboxylase 0.0
Internal
biog3_v1.0_unigene17905 biogeco3 v1.0 177
• AutoFact: Diaminopimelate epimerase, chloroplastic n=2 Tax=Oryza sativa RepID=DAPF_ORYSJ 0.0
• Blast2go: diaminopimelate epimerase 0.0
unknown
biog3_v1.0_unigene18437 biogeco3 v1.0 188
• AutoFact: Diaminopimelate decarboxylase, putative n=1 Tax=Ricinus communis RepID=B9RH82_RICCO 0.0
• Blast2go: diaminopimelate decarboxylase 0.0
unknown
biog3_v1.0_unigene18683 biogeco3 v1.0 113
• AutoFact: Diaminopimelate epimerase, chloroplastic n=2 Tax=Oryza sativa RepID=DAPF_ORYSJ 0.0
• Blast2go: diaminopimelate epimerase 0.0
unknown
biog3_v1.0_unigene19533 biogeco3 v1.0 296
• AutoFact: Diaminopimelate epimerase, chloroplastic n=2 Tax=Oryza sativa RepID=DAPF_ORYSJ 0.0
• Blast2go: diaminopimelate epimerase 0.0
unknown
biog3_v1.0_unigene23472 biogeco3 v1.0 179
• AutoFact: LL-diaminopimelate aminotransferase, chloroplastic n=3 Tax=Brassicaceae RepID=DAPAT_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ll-diaminopimelate aminotransferase 0.0
Internal
biog3_v1.0_unigene24783 biogeco3 v1.0 918
• AutoFact: Diaminopimelate decarboxylase, putative n=1 Tax=Ricinus communis RepID=B9RH82_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: diaminopimelate decarboxylase 0.0
C-terminus
biog3_v1.0_unigene25168 biogeco3 v1.0 98
• AutoFact: ADP-ribosylation factor GTPase-activating protein AGD4 n=2 Tax=Arabidopsis RepID=AGD4_ARATH 2.0e-29
• FL-Next: tr=Putative uncharacterized protein VAN3-2; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: arf-gap domain 4 2.44904e-38
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain