Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: ccr4-not transcription complex subunit

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene182 biogeco3 v1.0 641
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SKR3_VITVI 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ccr4-not transcription complex subunit 2.67825e-33
Internal
biog3_v1.0_unigene3659 biogeco3 v1.0 745
AutoFact: putative transcription regulatory protein [Oryza sativa Japonica Group] gb|ABB47976.2| transcriptional regulator, putative, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ccr4-not transcription complex subunit 0.0
N-terminus
biog3_v1.0_unigene15389 biogeco3 v1.0 296
AutoFact: RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] gb|AED97288.1| RNA binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana] 3.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ccr4-not transcription complex subunit 4.75058e-15
Putative N-terminus
biog3_v1.0_unigene15821 biogeco3 v1.0 310
AutoFact: CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] emb|CAB75492.1| putative protein [Arabidopsis thaliana] gb|AEE78053.1| CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ccr4-not transcription complex subunit 0.0
Internal
biog3_v1.0_unigene16311 biogeco3 v1.0 268
AutoFact: putative transcription regulatory protein (ISS) [Ostreococcus tauri] emb|CAL54599.1| putative transcription regulatory protein (ISS) [Ostreococcus tauri] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ccr4-not transcription complex subunit 0.0
Internal
biog3_v1.0_unigene22818 biogeco3 v1.0 328
AutoFact: CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] emb|CAB75492.1| putative protein [Arabidopsis thaliana] gb|AEE78053.1| CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: ccr4-not transcription complex subunit 7.60834e-19
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain