|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene692
|
biogeco3 v1.0
|
764
|
|
• AutoFact: putative wound-responsive protein [Arabidopsis thaliana] ref|NP_001031068.1| putative wound-responsive protein [Arabidopsis thaliana] gb|AAK59521.1| unknown protein [Arabidopsis thaliana] gb|AAL15188.1| unknown protein [Arabidopsis thaliana] dbj|BAH20173.
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: bifunctional nuclease in basal defense response 1
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene1139
|
biogeco3 v1.0
|
333
|
|
• AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: nucleic acid binding
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene1428
|
biogeco3 v1.0
|
822
|
|
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1670
|
biogeco3 v1.0
|
390
|
|
• AutoFact: double-strand break repair protein MRE11 [Arabidopsis thaliana] sp|Q9XGM2.1|MRE11_ARATH RecName: Full=Double-strand break repair protein MRE11 emb|CAB50793.1| Mre11 protein [Arabidopsis thaliana] dbj|BAB10749.1| DNA repair and meiosis protein Mre11 [Arabi
|
1.0e-11
|
|
• Blast2go: meiotic recombination 11
|
1.40712e-14
|
|
unknown
|
|
biog3_v1.0_unigene2279
|
biogeco3 v1.0
|
233
|
|
• AutoFact: Unassigned protein
|
|
|
• Blast2go: unknown [Picea sitchensis]
|
4.09715e-14
|
|
unknown
|
|
biog3_v1.0_unigene3425
|
biogeco3 v1.0
|
540
|
|
• AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene4889
|
biogeco3 v1.0
|
1658
|
|
• AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE
|
0.0
|
|
• FL-Next: sp=NifU-like protein 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: at4g01940 t7b11_20
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene6264
|
biogeco3 v1.0
|
431
|
|
• AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like
|
5.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: uvrb uvrc motif-containing protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene7250
|
biogeco3 v1.0
|
414
|
|
• AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: nucleic acid binding
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene7714
|
biogeco3 v1.0
|
414
|
|
• AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene7896
|
biogeco3 v1.0
|
748
|
|
• AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like
|
5.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: uvrb uvrc motif-containing protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene9065
|
biogeco3 v1.0
|
1135
|
|
• AutoFact: Ca(2+)-dependent DNase [Populus tomentosa]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dnase 2
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene9631
|
biogeco3 v1.0
|
1114
|
|
• AutoFact: putative wound-responsive protein [Arabidopsis thaliana] ref|NP_001031068.1| putative wound-responsive protein [Arabidopsis thaliana] gb|AAK59521.1| unknown protein [Arabidopsis thaliana] gb|AAL15188.1| unknown protein [Arabidopsis thaliana] dbj|BAH20173.
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: bifunctional nuclease in basal defense response 1
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene9664
|
biogeco3 v1.0
|
302
|
|
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum]
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene9732
|
biogeco3 v1.0
|
3252
|
|
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene9975
|
biogeco3 v1.0
|
282
|
|
• AutoFact: Endonuclease/exonuclease/phosphatase family protein-like n=2 Tax=Oryza sativa RepID=Q5ZE24_ORYSJ
|
4.00001e-40
|
|
• FL-Next: sp=Carbon catabolite repressor protein 4 homolog 5; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
6.5861e-44
|
|
C-terminus
|
|
biog3_v1.0_unigene10746
|
biogeco3 v1.0
|
672
|
|
• AutoFact: Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: nucleic acid binding
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene11161
|
biogeco3 v1.0
|
1242
|
|
• AutoFact: Flap endonuclease 1 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=FEN1_OSTLU
|
0.0
|
|
• FL-Next: sp=Flap endonuclease 1; Glycine max (Soybean) (Glycine hispida).
|
0.0
|
|
• Blast2go: flap endonuclease-1
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene13630
|
biogeco3 v1.0
|
281
|
|
• AutoFact: endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] gb|AAU94372.1| At3g48425 [Arabidopsis thaliana] gb|AAV59281.1| At3g48425 [Arabidopsis thaliana] gb|AEE78415.1| endonuclease/exonuclease/phosphatase domain-containing pro
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna-(apurinic or apyrimidinic site) lyase
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene17288
|
biogeco3 v1.0
|
315
|
|
• AutoFact: DNA repair protein UVH3 [Arabidopsis thaliana] sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA repair protein UVH3; AltName: Full=ERCC5 homolog; AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3; Short=AtXPG; AltName: Full=UV hypersensitive protein 3; AltNa
|
9.0e-37
|
|
• FL-Next: sp=DNA repair protein UVH3; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: dna-repair protein
|
1.4013e-45
|
|
Internal
|
