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Assembly Name: biogeco3 v1.0

Name: 3'-5' exonuclease activity

Term: GO:0008408  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene74 biogeco3 v1.0 1048
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rrp6-like protein 1 0.0
Putative Complete
biog3_v1.0_unigene552 biogeco3 v1.0 407
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 0.0
Blast2go: rrp6-like protein 1 0.0
unknown
biog3_v1.0_unigene1354 biogeco3 v1.0 357
AutoFact: DNA polymerase n=1 Tax=Populus trichocarpa RepID=B9HHA9_POPTR 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic subunit 0.0
Internal
biog3_v1.0_unigene1548 biogeco3 v1.0 532
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 0.0
FL-Next: tr=3'-5' exonuclease, putative; Ricinus communis (Castor bean). 0.0
Blast2go: rrp6-like protein 1 0.0
Internal
biog3_v1.0_unigene3906 biogeco3 v1.0 444
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic 0.0
Internal
biog3_v1.0_unigene4183 biogeco3 v1.0 499
AutoFact: small RNA degrading nuclease 3 [Arabidopsis thaliana] sp|Q8RXK2.1|SDN3_ARATH RecName: Full=Small RNA degrading nuclease 3 gb|AAL87318.1| unknown protein [Arabidopsis thaliana] gb|AAN71976.1| unknown protein [Arabidopsis thaliana] gb|AED98317.1| small RNA 0.0
FL-Next: sp=Small RNA degrading nuclease 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: small rna degrading nuclease 3 0.0
Internal
biog3_v1.0_unigene5564 biogeco3 v1.0 292
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna polymerase alpha catalytic 0.0
Internal
biog3_v1.0_unigene7317 biogeco3 v1.0 682
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9SC90_RICCO 0.0
FL-Next: sp=DNA polymerase alpha catalytic subunit; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna polymerase alpha catalytic 0.0
C-terminus
biog3_v1.0_unigene10487 biogeco3 v1.0 462
AutoFact: small RNA degrading nuclease 3 [Arabidopsis thaliana] sp|Q8RXK2.1|SDN3_ARATH RecName: Full=Small RNA degrading nuclease 3 gb|AAL87318.1| unknown protein [Arabidopsis thaliana] gb|AAN71976.1| unknown protein [Arabidopsis thaliana] gb|AED98317.1| small RNA 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: small rna degrading nuclease 3 0.0
Putative Complete
biog3_v1.0_unigene14044 biogeco3 v1.0 278
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 0.0
Blast2go: rrp6-like protein 1 0.0
Putative coding
biog3_v1.0_unigene17047 biogeco3 v1.0 233
AutoFact: small RNA degrading nuclease 3 [Arabidopsis thaliana] sp|Q8RXK2.1|SDN3_ARATH RecName: Full=Small RNA degrading nuclease 3 gb|AAL87318.1| unknown protein [Arabidopsis thaliana] gb|AAN71976.1| unknown protein [Arabidopsis thaliana] gb|AED98317.1| small RNA 0.0
FL-Next: sp=Small RNA degrading nuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: small rna degrading nuclease 3 0.0
Putative C-terminus
biog3_v1.0_unigene18733 biogeco3 v1.0 377
AutoFact: small RNA degrading nuclease 3 [Arabidopsis thaliana] sp|Q8RXK2.1|SDN3_ARATH RecName: Full=Small RNA degrading nuclease 3 gb|AAL87318.1| unknown protein [Arabidopsis thaliana] gb|AAN71976.1| unknown protein [Arabidopsis thaliana] gb|AED98317.1| small RNA 0.0
Blast2go: small rna degrading nuclease 3 0.0
unknown
biog3_v1.0_unigene22588 biogeco3 v1.0 232
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: werner syndrome-like exonuclease-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain