Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: chromosome, centromeric region

Term: GO:0000775  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene2176 biogeco3 v1.0 223
• AutoFact: zinc finger protein 330 variant [Homo sapiens] 0.0
• Blast2go: zinc finger protein 330 0.0
unknown
biog3_v1.0_unigene3861 biogeco3 v1.0 486
• AutoFact: centromere/kinetochore protein ZW10 [Arabidopsis thaliana] sp|O48626.1|ZW10_ARATH RecName: Full=Centromere/kinetochore protein zw10 homolog gb|AAB88246.1| AtZW10 [Arabidopsis thaliana] gb|AAL47437.1| At2g32900/T21L14.16 [Arabidopsis thaliana] gb|AEC08759. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: centromere kinetochore protein zw10 homolog 0.0
Internal
biog3_v1.0_unigene5124 biogeco3 v1.0 273
• AutoFact: SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_850809.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_974767.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_001078572.1| SCP1-like small phosphatase 5 [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: scp1-like small phosphatase 5 0.0
N-terminus
biog3_v1.0_unigene6440 biogeco3 v1.0 487
• AutoFact: pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 0.0
• FL-Next: sp=Structural maintenance of chromosomes protein 2-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: structural maintenance of chromosomes protein 3-like 0.0
Internal
biog3_v1.0_unigene6665 biogeco3 v1.0 658
• AutoFact: zinc finger protein 330 variant [Homo sapiens] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: zinc finger protein 330 0.0
Internal
biog3_v1.0_unigene8887 biogeco3 v1.0 336
• AutoFact: centromere/kinetochore protein ZW10 [Arabidopsis thaliana] sp|O48626.1|ZW10_ARATH RecName: Full=Centromere/kinetochore protein zw10 homolog gb|AAB88246.1| AtZW10 [Arabidopsis thaliana] gb|AAL47437.1| At2g32900/T21L14.16 [Arabidopsis thaliana] gb|AEC08759. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: centromere kinetochore protein zw10 homolog 0.0
Internal
biog3_v1.0_unigene11694 biogeco3 v1.0 349
• AutoFact: SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_850809.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_974767.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_001078572.1| SCP1-like small phosphatase 5 [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: scp1-like small phosphatase 5 0.0
Internal
biog3_v1.0_unigene12215 biogeco3 v1.0 1315
• AutoFact: SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_850809.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_974767.1| SCP1-like small phosphatase 5 [Arabidopsis thaliana] ref|NP_001078572.1| SCP1-like small phosphatase 5 [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: scp1-like small phosphatase 5 0.0
C-terminus
biog3_v1.0_unigene13116 biogeco3 v1.0 664
• AutoFact: centromere protein O [Arabidopsis thaliana] ref|NP_850804.1| centromere protein O [Arabidopsis thaliana] gb|AAN86147.1| unknown protein [Arabidopsis thaliana] gb|AED91585.1| centromere protein O [Arabidopsis thaliana] gb|AED91586.1| centromere protein O [ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: centromere protein o 0.0
Internal
biog3_v1.0_unigene14763 biogeco3 v1.0 308
• AutoFact: centromere/kinetochore protein ZW10 [Arabidopsis thaliana] sp|O48626.1|ZW10_ARATH RecName: Full=Centromere/kinetochore protein zw10 homolog gb|AAB88246.1| AtZW10 [Arabidopsis thaliana] gb|AAL47437.1| At2g32900/T21L14.16 [Arabidopsis thaliana] gb|AEC08759. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: centromere kinetochore protein zw10 homolog 0.0
Putative C-terminus
biog3_v1.0_unigene15494 biogeco3 v1.0 350
• AutoFact: centromere protein C [Arabidopsis thaliana] gb|AAU04629.1| CENP-C [Arabidopsis thaliana] gb|AEE29346.1| centromere protein C [Arabidopsis thaliana] 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: cenp-c 1.8712e-29
Internal
biog3_v1.0_unigene17650 biogeco3 v1.0 261
• AutoFact: centromere/kinetochore protein ZW10 [Arabidopsis thaliana] sp|O48626.1|ZW10_ARATH RecName: Full=Centromere/kinetochore protein zw10 homolog gb|AAB88246.1| AtZW10 [Arabidopsis thaliana] gb|AAL47437.1| At2g32900/T21L14.16 [Arabidopsis thaliana] gb|AEC08759. 5.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: centromere kinetochore protein zw10 homolog 0.0
Internal
biog3_v1.0_unigene23356 biogeco3 v1.0 278
• AutoFact: centromere/kinetochore protein ZW10 [Arabidopsis thaliana] sp|O48626.1|ZW10_ARATH RecName: Full=Centromere/kinetochore protein zw10 homolog gb|AAB88246.1| AtZW10 [Arabidopsis thaliana] gb|AAL47437.1| At2g32900/T21L14.16 [Arabidopsis thaliana] gb|AEC08759. 0.0
• Blast2go: centromere kinetochore protein zw10 homolog 0.0
unknown
biog3_v1.0_unigene24260 biogeco3 v1.0 220
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9REC4_RICCO 0.0
• Blast2go: serine threonine kinase 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain