Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: chromosome

Term: GO:0005694  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1031 biogeco3 v1.0 1617
AutoFact: predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=UPI0001621F83 0.0
FL-Next: sp=DNA topoisomerase 6 subunit A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase 6 subunit a-like 0.0
Complete
biog3_v1.0_unigene1119 biogeco3 v1.0 1142
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: dna topoisomerase 1 1.4013e-45
N-terminus
biog3_v1.0_unigene1781 biogeco3 v1.0 296
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene2931 biogeco3 v1.0 847
AutoFact: putative topoisomerase VI subunit B [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna topoisomerase 6 subunit b 0.0
Internal
biog3_v1.0_unigene3228 biogeco3 v1.0 631
AutoFact: cohesin complex subunit SA-1/2 [Arabidopsis thaliana] emb|CAB45374.1| stromalin protein [Arabidopsis thaliana] gb|AAL36271.1| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] gb|AAC63652.2| putative putative sister-chromatide co 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sister-chromatide cohesion protein 0.0
Internal
biog3_v1.0_unigene3522 biogeco3 v1.0 815
AutoFact: PREDICTED: similar to Late histone H2A.2.2 n=2 Tax=Hydra magnipapillata RepID=UPI0001924B8D 3.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
biog3_v1.0_unigene4651 biogeco3 v1.0 492
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: sp=FACT complex subunit SPT16; Zea mays (Maize). 0.0
Blast2go: fact complex subunit 0.0
Internal
biog3_v1.0_unigene4843 biogeco3 v1.0 710
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fact complex subunit 0.0
Internal
biog3_v1.0_unigene5288 biogeco3 v1.0 231
AutoFact: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 [Arabidopsis thaliana] sp|Q8GZB6.2|SUVH4_ARATH RecName: Full=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4; AltName: Full=Histone H3-K9 methyltransferase 4; Short=H3-K9-HMTase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh4-like 0.0
Internal
biog3_v1.0_unigene5683 biogeco3 v1.0 372
AutoFact: FACT complex subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TYN6_PHYPA 0.0
FL-Next: sp=FACT complex subunit SPT16; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: fact complex subunit 0.0
Internal
biog3_v1.0_unigene5765 biogeco3 v1.0 506
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
Blast2go: dna topoisomerase 1 1.4013e-45
Coding
biog3_v1.0_unigene5888 biogeco3 v1.0 921
AutoFact: putative topoisomerase VI subunit B [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna topoisomerase 6 subunit b 0.0
C-terminus
biog3_v1.0_unigene5929 biogeco3 v1.0 676
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Complete
biog3_v1.0_unigene5945 biogeco3 v1.0 759
AutoFact: cohesin complex subunit SA-1/2 [Arabidopsis thaliana] emb|CAB45374.1| stromalin protein [Arabidopsis thaliana] gb|AAL36271.1| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] gb|AAC63652.2| putative putative sister-chromatide co 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sister-chromatide cohesion protein 0.0
Internal
biog3_v1.0_unigene7072 biogeco3 v1.0 436
AutoFact: Structural maintenance of chromosomes 5 smc5, putative n=1 Tax=Ricinus communis RepID=B9RVK1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: structural maintenance of chromosomes 5 0.0
Complete
biog3_v1.0_unigene7850 biogeco3 v1.0 299
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase 1 1.4013e-45
Internal
biog3_v1.0_unigene7993 biogeco3 v1.0 283
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-35
Blast2go: histone h4 1.12104e-44
Coding
biog3_v1.0_unigene8378 biogeco3 v1.0 403
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Putative Complete
biog3_v1.0_unigene8451 biogeco3 v1.0 413
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sister-chromatide cohesion protein 2.9956e-12
Internal
biog3_v1.0_unigene9291 biogeco3 v1.0 255
AutoFact: Histone H4 n=1 Tax=Ostreococcus tauri RepID=Q01FF9_OSTTA 5.0e-36
Blast2go: histone h4 4.2039e-45
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain