Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: response to red light

Term: GO:0010114  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1373 biogeco3 v1.0 985
AutoFact: ABC transporter family protein n=1 Tax=Camellia sinensis RepID=F5A834_CAMSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family protein 0.0
Putative C-terminus
biog3_v1.0_unigene1440 biogeco3 v1.0 892
AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
FL-Next: sp=Adagio-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: adagio protein 1 0.0
C-terminus
biog3_v1.0_unigene5186 biogeco3 v1.0 303
AutoFact: Protein FAM50A, putative n=2 Tax=fabids RepID=B9STC7_RICCO 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene5651 biogeco3 v1.0 1390
AutoFact: putative Der1-like family protein [Cynodon dactylon] 0.0
FL-Next: sp=Derlin-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: derlin- -like 0.0
Complete
biog3_v1.0_unigene6755 biogeco3 v1.0 287
AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
Blast2go: at4g04770 t4b21_16 0.0
unknown
biog3_v1.0_unigene6905 biogeco3 v1.0 560
AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase sigma factor rpod-like 0.0
Internal
biog3_v1.0_unigene7936 biogeco3 v1.0 451
AutoFact: Transcription factor n=1 Tax=Lycoris longituba RepID=D6MKH0_9ASPA 9.99967e-42
Blast2go: transcription factor hy5 0.0
Putative coding
biog3_v1.0_unigene9416 biogeco3 v1.0 281
AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna polymerase sigma factor rpod-like 0.0
Internal
biog3_v1.0_unigene10360 biogeco3 v1.0 978
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: ribulose bisphosphate small subunit 0.0
Complete
biog3_v1.0_unigene10699 biogeco3 v1.0 1630
AutoFact: ATP-binding cassette transporter, subfamily I, member 15, ABC component protein PpABCI15 (Fragment) n=2 Tax=Physcomitrella patens subsp. patens RepID=A9RAW0_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at4g04770 t4b21_16 0.0
C-terminus
biog3_v1.0_unigene11493 biogeco3 v1.0 1259
AutoFact: Lhcb5 protein n=6 Tax=Pinaceae RepID=Q41040_PINSY 0.0
FL-Next: tr=Lhcb5 protein; Pinus sylvestris (Scots pine). 0.0
Blast2go: chlorophyll a-b binding protein chloroplastic-like 0.0
Complete
biog3_v1.0_unigene12010 biogeco3 v1.0 885
AutoFact: Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pinus thunbergii RepID=RBS_PINTH 0.0
FL-Next: sp=Ribulose bisphosphate carboxylase small chain, chloroplastic; Pinus thunbergii (Japanese black pine) (Pinus thunbergiana). 0.0
Blast2go: ribulose bisphosphate small subunit 0.0
Complete
biog3_v1.0_unigene13987 biogeco3 v1.0 273
AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adagio protein 1 0.0
Internal
biog3_v1.0_unigene14209 biogeco3 v1.0 285
AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
FL-Next: sp=Adagio protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: adagio protein 1 0.0
Internal
biog3_v1.0_unigene16063 biogeco3 v1.0 275
AutoFact: RNA polymerase sigma factor [Arabidopsis thaliana] emb|CAA77213.1| sigma-like factor [Arabidopsis thaliana] dbj|BAA78109.1| RNA polymerase sigma subunit SigE [Arabidopsis thaliana] dbj|BAB11572.1| sigma-like factor [Arabidopsis thaliana] dbj|BAH19595.1| A 0.0
Blast2go: rna polymerase sigma factor rpod-like 0.0
Putative coding
biog3_v1.0_unigene17778 biogeco3 v1.0 259
AutoFact: [R] COG2319 FOG: WD40 repeat 0.0001
Blast2go: photomorphogenesis repressor protein 0.0
unknown
biog3_v1.0_unigene19572 biogeco3 v1.0 327
AutoFact: ABC transporter family protein n=1 Tax=Camellia sinensis RepID=F5A834_CAMSI 0.0
Blast2go: abc transporter family protein 0.0
Putative coding
biog3_v1.0_unigene22766 biogeco3 v1.0 442
AutoFact: sigma factor [Nicotiana tabacum] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: rna polymerase sigma subunit 1 1.27865e-23
C-terminus
biog3_v1.0_unigene23613 biogeco3 v1.0 341
AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adagio protein 1 0.0
Putative N-terminus
biog3_v1.0_unigene24555 biogeco3 v1.0 270
AutoFact: phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] gb|AEE30640.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome and flowering time regulatory protein 1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain