Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: primary root development

Term: GO:0080022  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1348 biogeco3 v1.0 450
AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
Blast2go: two-component response regulator arr2-like 1.00893e-43
Coding
biog3_v1.0_unigene2329 biogeco3 v1.0 667
AutoFact: tryptophan aminotransferase related 2 [Arabidopsis thaliana] ref|NP_974608.1| tryptophan aminotransferase related 2 [Arabidopsis thaliana] gb|AAK92714.1| putative alliin lyase [Arabidopsis thaliana] gb|AAM14394.1| putative alliin lyase [Arabidopsis thalia 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: alliin lyase 0.0
Internal
biog3_v1.0_unigene2942 biogeco3 v1.0 630
AutoFact: Histidyl-tRNA synthetase n=3 Tax=Andropogoneae RepID=B6TS97_MAIZE 0.0
FL-Next: sp=Histidyl-tRNA synthetase; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene6340 biogeco3 v1.0 849
AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
Blast2go: two-component response regulator arr2-like 1.00893e-43
unknown
biog3_v1.0_unigene6429 biogeco3 v1.0 2013
AutoFact: SNF1-related protein kinase [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf1-related protein kinase catalytic subunit alpha kin10 0.0
Complete
biog3_v1.0_unigene7229 biogeco3 v1.0 485
AutoFact: tryptophan aminotransferase related 2 [Arabidopsis thaliana] ref|NP_974608.1| tryptophan aminotransferase related 2 [Arabidopsis thaliana] gb|AAK92714.1| putative alliin lyase [Arabidopsis thaliana] gb|AAM14394.1| putative alliin lyase [Arabidopsis thalia 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: alliin lyase 0.0
Putative N-terminus
biog3_v1.0_unigene7392 biogeco3 v1.0 1852
AutoFact: DUF1423 multi-domain protein 0.0
FL-Next: sp=OBERON-like protein; Nicotiana benthamiana. 0.0
Blast2go: potyvirus vpg interacting protein 0.0
Complete
biog3_v1.0_unigene12057 biogeco3 v1.0 1663
AutoFact: Glyceraldehyde-3-phosphate dehydrogenase n=5 Tax=Pinaceae RepID=Q37264_PINSY 0.0
FL-Next: tr=Glyceraldehyde-3-phosphate dehydrogenase; Pinus sylvestris (Scots pine). Plastid; Chloroplast. 0.0
Blast2go: glyceraldehyde-3-phosphate dehydrogenase 0.0
Complete
biog3_v1.0_unigene12077 biogeco3 v1.0 1417
AutoFact: Triosephosphate isomerase n=2 Tax=Picea sitchensis RepID=A9NUV2_PICSI 0.0
FL-Next: sp=Triosephosphate isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: triosephosphate isomerase 0.0
Complete
biog3_v1.0_unigene22370 biogeco3 v1.0 212
AutoFact: Histidyl-tRNA synthetase n=3 Tax=Andropogoneae RepID=B6TS97_MAIZE 0.0
FL-Next: tr=Predicted protein; Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23363 biogeco3 v1.0 328
AutoFact: SNF1-related protein kinase [Cucumis sativus] 0.0
Blast2go: snf1-related protein kinase catalytic subunit alpha kin10 0.0
unknown
biog3_v1.0_unigene26605 biogeco3 v1.0 61
AutoFact: Glyceraldehyde-3-phosphate dehydrogenase n=5 Tax=Pinaceae RepID=Q37264_PINSY 0.0
Blast2go: glyceraldehyde-3-phosphate dehydrogenase 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain