Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: regulation of chlorophyll biosynthetic process

Term: GO:0010380  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene1258 biogeco3 v1.0 484
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
• FL-Next: sp=ABC transporter B family member 25, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: abc transporter family of the mitochondria family 0.0
N-terminus
biog3_v1.0_unigene1348 biogeco3 v1.0 450
• AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
• Blast2go: two-component response regulator arr2-like 1.00893e-43
Coding
biog3_v1.0_unigene1428 biogeco3 v1.0 822
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
C-terminus
biog3_v1.0_unigene3485 biogeco3 v1.0 479
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R8Q6_RICCO 0.0
• FL-Next: Isoform 2 of U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene6340 biogeco3 v1.0 849
• AutoFact: Putative type-b response regulator (Sensor histidine kinase) n=1 Tax=Malus x domestica RepID=E4Z8Q8_MALDO 8.00001e-41
• Blast2go: two-component response regulator arr2-like 1.00893e-43
unknown
biog3_v1.0_unigene7832 biogeco3 v1.0 446
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Coding
biog3_v1.0_unigene7888 biogeco3 v1.0 328
• AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 1.0e-32
• FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
• Blast2go: abc transporter b family member mitochondrial-like 4.25317e-39
C-terminus
biog3_v1.0_unigene9027 biogeco3 v1.0 350
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R8Q6_RICCO 0.0
• FL-Next: sp=U-box domain-containing protein 43; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene9537 biogeco3 v1.0 204
• AutoFact: Transporter ATM1, mitochondrial, putative n=1 Tax=Ricinus communis RepID=B9T3V9_RICCO 7.00649e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: abc transporter family of the mitochondria family 0.0
Internal
biog3_v1.0_unigene9664 biogeco3 v1.0 302
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum] 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
unknown
biog3_v1.0_unigene9732 biogeco3 v1.0 3252
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Complete
biog3_v1.0_unigene12238 biogeco3 v1.0 560
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: sp=Chaperone protein ClpC, chloroplastic; Pisum sativum (Garden pea). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Internal
biog3_v1.0_unigene13511 biogeco3 v1.0 467
• AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LPW6_PICSI 0.0
• Blast2go: nadph-dependent thioredoxin reductase 3-like 0.0
unknown
biog3_v1.0_unigene15099 biogeco3 v1.0 292
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R8Q6_RICCO 0.0
• FL-Next: sp=U-box domain-containing protein 44; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene17251 biogeco3 v1.0 332
• AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LPW6_PICSI 0.0
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nadph-dependent thioredoxin reductase 3-like 0.0
Internal
biog3_v1.0_unigene18520 biogeco3 v1.0 277
• AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LRB6_PICSI 0.0
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nadph-dependent thioredoxin reductase 3-like 0.0
Internal
biog3_v1.0_unigene19356 biogeco3 v1.0 483
• AutoFact: U-box domain-containing protein 44 [Arabidopsis thaliana] sp|Q9LM76.1|PUB44_ARATH RecName: Full=U-box domain-containing protein 44; AltName: Full=Plant U-box protein 44; AltName: Full=Protein SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1 gb|AAF80621.1|AC069 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 3.38845e-27
N-terminus
biog3_v1.0_unigene23251 biogeco3 v1.0 347
• AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LPW6_PICSI 0.0
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nadph-dependent thioredoxin reductase 3-like 0.0
Internal
biog3_v1.0_unigene25454 biogeco3 v1.0 430
• AutoFact: Thioredoxin reductase n=1 Tax=Picea sitchensis RepID=B8LPW6_PICSI 0.0
• FL-Next: sp=Thioredoxin reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nadph-dependent thioredoxin reductase 3-like 0.0
Internal
biog3_v1.0_unigene26245 biogeco3 v1.0 165
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: chaperone protein chloroplastic-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain