Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: translational initiation

Term: GO:0006413  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene136 biogeco3 v1.0 1696
• AutoFact: RNA polymerase I-associated factor PAF67 [Arabidopsis thaliana] ref|NP_680223.1| RNA polymerase I-associated factor PAF67 [Arabidopsis thaliana] gb|AED93480.1| RNA polymerase I-associated factor PAF67 [Arabidopsis thaliana] gb|AED93481.1| RNA polymerase I 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit l-like 0.0
Complete
biog3_v1.0_unigene534 biogeco3 v1.0 2125
• AutoFact: eukaryotic translation initiation factor 5 [Zea mays] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 5 0.0
Complete
biog3_v1.0_unigene1129 biogeco3 v1.0 1157
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
Putative C-terminus
biog3_v1.0_unigene2452 biogeco3 v1.0 612
• AutoFact: pfam12807, eIF3_p135, Translation initiation factor eIF3 subunit 135 6.0e-34
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein kiaa0664 homolog 0.0
Internal
biog3_v1.0_unigene2497 biogeco3 v1.0 1221
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
N-terminus
biog3_v1.0_unigene2928 biogeco3 v1.0 248
• AutoFact: translation initiation factor 3 subunit B [Arabidopsis thaliana] sp|Q9C5Z1.1|EIF3B_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit B; Short=eIF3b; AltName: Full=eIF-3-eta; AltName: Full=eIF3 p110; AltName: Full=p82 gb|AAG53615.1|AF2 0.0
• Blast2go: eukaryotic translation initiation factor 3 subunit b-like 0.0
unknown
biog3_v1.0_unigene3763 biogeco3 v1.0 1522
• AutoFact: translation initiation factor eIF-3 subunit 7 [Arabidopsis thaliana] ref|NP_001031683.1| translation initiation factor eIF-3 subunit 7 [Arabidopsis thaliana] ref|NP_001031684.1| translation initiation factor eIF-3 subunit 7 [Arabidopsis thaliana] ref|NP_0 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: translation initiation factor eif-3 subunit 7 0.0
Complete
biog3_v1.0_unigene4361 biogeco3 v1.0 635
• AutoFact: TBP-associated factor 13 n=1 Tax=Solanum melongena RepID=F4YY46_SOLME 0.0
• FL-Next: tr=TBP-associated factor 13; Solanum melongena (Eggplant) (Aubergine). 0.0
• Blast2go: transcription factor tfiid 0.0
Putative Complete
biog3_v1.0_unigene4437 biogeco3 v1.0 457
• AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9SJV6_RICCO 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: protein argonaute 1-like 0.0
Internal
biog3_v1.0_unigene4667 biogeco3 v1.0 887
• AutoFact: transcription initiation factor TFIIE alpha subunit [Arabidopsis thaliana] gb|AAL07078.1| unknown protein [Arabidopsis thaliana] gb|AAM20302.1| unknown protein [Arabidopsis thaliana] gb|AAR28007.1| TFIIE-alpha 1 [Arabidopsis thaliana] gb|AEE27553.1| trans 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: general transcription factor iie subunit 1-like 0.0
N-terminus
biog3_v1.0_unigene4989 biogeco3 v1.0 851
• AutoFact: translation initiation factor eIF-2 gamma subunit [Arabidopsis thaliana] gb|AAK29674.1|AF353097_1 protein synthesis initiation factor eIF2 gamma [Arabidopsis thaliana] gb|AAC16745.1| Strong similarity to initiation factor eIF-2, gb|U37354 from S. pombe. E 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 2 subunit 3 0.0
C-terminus
biog3_v1.0_unigene5749 biogeco3 v1.0 616
• AutoFact: eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] dbj|BAE99137.1| hypothetical protein [Arabidopsis thaliana] gb|AEE35192.1| eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Eukaryotic translation initiation factor SUI1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: eukaryotic translation initiation factor 2d-like 0.0
Internal
biog3_v1.0_unigene6005 biogeco3 v1.0 1311
• AutoFact: translation initiation factor nCBP [Triticum aestivum] 0.0
• FL-Next: sp=Eukaryotic translation initiation factor 4E type 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: cap-binding protein 0.0
Complete
biog3_v1.0_unigene6522 biogeco3 v1.0 401
• AutoFact: translation initiation factor eIF-2 gamma subunit [Arabidopsis thaliana] gb|AAK29674.1|AF353097_1 protein synthesis initiation factor eIF2 gamma [Arabidopsis thaliana] gb|AAC16745.1| Strong similarity to initiation factor eIF-2, gb|U37354 from S. pombe. E 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 2 subunit 3 0.0
Internal
biog3_v1.0_unigene7823 biogeco3 v1.0 432
• AutoFact: Methylthioribose-1-phosphate isomerase n=1 Tax=Nicotiana tabacum RepID=MTNA_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methylthioribose-1-phosphate isomerase 0.0
Internal
biog3_v1.0_unigene8723 biogeco3 v1.0 689
• AutoFact: translation initiation factor eIF-3 subunit 10 [Arabidopsis thaliana] sp|Q9LD55.1|EIF3A_ARATH RecName: Full=Eukaryotic translation initiation factor 3 subunit A; Short=eIF3a; AltName: Full=Eukaryotic translation initiation factor 3 large subunit; AltName: 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene8805 biogeco3 v1.0 185
• AutoFact: DEAD-box ATP-dependent RNA helicase 2 n=6 Tax=BEP clade RepID=RH2_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nicotiana eukaryotic translation initiation factor 4a 0.0
N-terminus
biog3_v1.0_unigene9281 biogeco3 v1.0 714
• AutoFact: ARGONAUTE 1 n=2 Tax=Nicotiana RepID=D6RUV9_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: argonaute protein group 0.0
Complete
biog3_v1.0_unigene9470 biogeco3 v1.0 1346
• AutoFact: Eukaryotic initiation factor 4B n=4 Tax=Arabidopsis RepID=Q9LIN5_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic initiation factor 4b 0.0
C-terminus
biog3_v1.0_unigene9715 biogeco3 v1.0 2316
• AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9SJV6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein argonaute 1-like 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain