Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: RNA polymerase II carboxy-terminal domain kinase activity

Term: GO:0008353  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene88 biogeco3 v1.0 255
• AutoFact: putative serine/threonine protein kinase [Arabidopsis thaliana] gb|AAK25900.1|AF360190_1 putative kinase [Arabidopsis thaliana] gb|AAK64081.1| putative kinase [Arabidopsis thaliana] gb|AEE84141.1| putative serine/threonine protein kinase [Arabidopsis thal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase f-4-like 0.0
Internal
biog3_v1.0_unigene1045 biogeco3 v1.0 1096
• AutoFact: putative cyclin-dependent kinase E1 [Arabidopsis thaliana] dbj|BAF00561.1| cdc2-like protein kinase like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase e-1 0.0
C-terminus
biog3_v1.0_unigene1148 biogeco3 v1.0 1523
• AutoFact: casein kinase 2, alpha polypeptide [Arabidopsis thaliana] gb|AAC17823.1| putative casein kinase II catalytic (alpha) subunit [Arabidopsis thaliana] gb|AAL32709.1| putative casein kinase II catalytic (alpha) subunit [Arabidopsis thaliana] gb|AAM10040.1| pu 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: casein kinase ii alpha subunit 0.0
Complete
biog3_v1.0_unigene1592 biogeco3 v1.0 576
• AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
Putative N-terminus
biog3_v1.0_unigene1648 biogeco3 v1.0 287
• AutoFact: CDK-activating kinase n=1 Tax=Medicago sativa subsp. x varia RepID=Q947K6_MEDSV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase d-1-like 0.0
Internal
biog3_v1.0_unigene4364 biogeco3 v1.0 399
• AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
• Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
unknown
biog3_v1.0_unigene5190 biogeco3 v1.0 286
• AutoFact: CDK-activating kinase n=1 Tax=Medicago sativa subsp. x varia RepID=Q947K6_MEDSV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase d-1-like 0.0
Internal
biog3_v1.0_unigene5280 biogeco3 v1.0 721
• AutoFact: Cdk10/11, putative n=1 Tax=Ricinus communis RepID=B9RML9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase g-2-like 0.0
C-terminus
biog3_v1.0_unigene5699 biogeco3 v1.0 284
• AutoFact: casein kinase 2, alpha polypeptide [Arabidopsis thaliana] gb|AAC17823.1| putative casein kinase II catalytic (alpha) subunit [Arabidopsis thaliana] gb|AAL32709.1| putative casein kinase II catalytic (alpha) subunit [Arabidopsis thaliana] gb|AAM10040.1| pu 0.0
• Blast2go: casein kinase ii alpha subunit 0.0
unknown
biog3_v1.0_unigene6424 biogeco3 v1.0 312
• AutoFact: putative serine/threonine protein kinase [Arabidopsis thaliana] gb|AAK25900.1|AF360190_1 putative kinase [Arabidopsis thaliana] gb|AAK64081.1| putative kinase [Arabidopsis thaliana] gb|AEE84141.1| putative serine/threonine protein kinase [Arabidopsis thal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase f-4-like 0.0
C-terminus
biog3_v1.0_unigene6459 biogeco3 v1.0 962
• AutoFact: putative serine/threonine protein kinase [Arabidopsis thaliana] gb|AAK25900.1|AF360190_1 putative kinase [Arabidopsis thaliana] gb|AAK64081.1| putative kinase [Arabidopsis thaliana] gb|AEE84141.1| putative serine/threonine protein kinase [Arabidopsis thal 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase f-4-like 0.0
N-terminus
biog3_v1.0_unigene7813 biogeco3 v1.0 461
• AutoFact: putative cyclin-dependent kinase E1 [Arabidopsis thaliana] dbj|BAF00561.1| cdc2-like protein kinase like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase e-1 0.0
Internal
biog3_v1.0_unigene8754 biogeco3 v1.0 682
• AutoFact: putative serine/threonine protein kinase [Arabidopsis thaliana] gb|AAK25900.1|AF360190_1 putative kinase [Arabidopsis thaliana] gb|AAK64081.1| putative kinase [Arabidopsis thaliana] gb|AEE84141.1| putative serine/threonine protein kinase [Arabidopsis thal 0.0
• Blast2go: cyclin-dependent kinase f-4-like 0.0
Putative coding
biog3_v1.0_unigene8864 biogeco3 v1.0 838
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_129.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TT82_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: casein kinase ii alpha subunit 0.0
Internal
biog3_v1.0_unigene10033 biogeco3 v1.0 323
• AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
Internal
biog3_v1.0_unigene11799 biogeco3 v1.0 1656
• AutoFact: Cyclin-dependent kinase C-1 n=5 Tax=Oryza sativa RepID=CDKC1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase c-2-like 0.0
Putative C-terminus
biog3_v1.0_unigene14621 biogeco3 v1.0 294
• AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
Internal
biog3_v1.0_unigene15919 biogeco3 v1.0 230
• AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
Internal
biog3_v1.0_unigene16016 biogeco3 v1.0 280
• AutoFact: CDK-activating kinase n=1 Tax=Medicago sativa subsp. x varia RepID=Q947K6_MEDSV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase d-1-like 0.0
Internal
biog3_v1.0_unigene16676 biogeco3 v1.0 329
• AutoFact: putative cyclin-dependent kinase E1 [Arabidopsis thaliana] dbj|BAF00561.1| cdc2-like protein kinase like protein [Arabidopsis thaliana] 0.0
• Blast2go: cyclin-dependent kinase e-1 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain