Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: RNA polymerase II carboxy-terminal domain kinase activity

Term: GO:0008353  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene16846 biogeco3 v1.0 243
• AutoFact: casein kinase II alpha subunit [Oryza sativa Indica Group] dbj|BAB21591.1| casein kinase II alpha subunit [Oryza sativa Indica Group] gb|ABB17668.1| Hd6 [Oryza sativa Indica Group] gb|ABB17669.1| Hd6 [Oryza sativa Indica Group] dbj|BAG82852.1| casein kina 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: casein kinase ii alpha subunit 0.0
Putative N-terminus
biog3_v1.0_unigene16922 biogeco3 v1.0 393
• AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
Internal
biog3_v1.0_unigene17135 biogeco3 v1.0 256
• AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
Internal
biog3_v1.0_unigene17331 biogeco3 v1.0 229
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_129.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TT82_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: casein kinase ii alpha subunit 0.0
C-terminus
biog3_v1.0_unigene18136 biogeco3 v1.0 72
• AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Probable serine/threonine-protein kinase At1g54610; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
Internal
biog3_v1.0_unigene20399 biogeco3 v1.0 306
• AutoFact: casein kinase II alpha subunit [Oryza sativa Indica Group] dbj|BAB21591.1| casein kinase II alpha subunit [Oryza sativa Indica Group] gb|ABB17668.1| Hd6 [Oryza sativa Indica Group] gb|ABB17669.1| Hd6 [Oryza sativa Indica Group] dbj|BAG82852.1| casein kina 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: casein kinase ii alpha subunit 0.0
Internal
biog3_v1.0_unigene22318 biogeco3 v1.0 314
• AutoFact: CDK-activating kinase n=1 Tax=Medicago sativa subsp. x varia RepID=Q947K6_MEDSV 0.0
• Blast2go: cyclin-dependent kinase d-1-like 0.0
unknown
biog3_v1.0_unigene23330 biogeco3 v1.0 345
• AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
• Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
unknown
biog3_v1.0_unigene24321 biogeco3 v1.0 434
• AutoFact: casein kinase II alpha subunit [Oryza sativa Indica Group] dbj|BAB21591.1| casein kinase II alpha subunit [Oryza sativa Indica Group] gb|ABB17668.1| Hd6 [Oryza sativa Indica Group] gb|ABB17669.1| Hd6 [Oryza sativa Indica Group] dbj|BAG82852.1| casein kina 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: casein kinase ii alpha subunit 0.0
C-terminus
biog3_v1.0_unigene24530 biogeco3 v1.0 323
• AutoFact: Cyclin-dependent kinase C-1 n=5 Tax=Oryza sativa RepID=CDKC1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cyclin-dependent kinase c-2-like 0.0
C-terminus
biog3_v1.0_unigene25134 biogeco3 v1.0 93
• AutoFact: putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] dbj|BAD30726.1| putative CRK1 protein(cdc2-related kinase 1) [Oryza sativa Japonica Group] 0.0
• Blast2go: probable serine threonine-protein kinase at1g54610-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain