Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: SCF ubiquitin ligase complex

Term: GO:0019005  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene395 biogeco3 v1.0 390
• AutoFact: PREDICTED: similar to F-box-containing protein 2 n=2 Tax=Vitis vinifera RepID=UPI000198358B 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: f-box protein skip16 0.0
C-terminus
biog3_v1.0_unigene540 biogeco3 v1.0 263
• AutoFact: Coronatine-insensitive protein, putative n=1 Tax=Ricinus communis RepID=B9SWQ0_RICCO 0.0
• Blast2go: coronitine insensitive 1 0.0
unknown
biog3_v1.0_unigene887 biogeco3 v1.0 302
• AutoFact: RING-box protein 1a n=7 Tax=rosids RepID=RBX1A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-box protein 0.0
C-terminus
biog3_v1.0_unigene1047 biogeco3 v1.0 1110
• AutoFact: PREDICTED: similar to F-box-containing protein 2 n=2 Tax=Vitis vinifera RepID=UPI000198358B 0.0
• FL-Next: sp=F-box protein SKIP16; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box protein skip16 0.0
N-terminus
biog3_v1.0_unigene1440 biogeco3 v1.0 892
• AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
• FL-Next: sp=Adagio-like protein 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: adagio protein 1 0.0
C-terminus
biog3_v1.0_unigene1558 biogeco3 v1.0 416
• AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene1691 biogeco3 v1.0 649
• AutoFact: F-box protein ORE9 n=12 Tax=Arabidopsis RepID=ORE9_ARATH 5.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: max2 0.0
Internal
biog3_v1.0_unigene2753 biogeco3 v1.0 424
• AutoFact: cullin 3 [Arabidopsis thaliana] sp|Q9ZVH4.1|CUL3A_ARATH RecName: Full=Cullin-3A; Short=AtCUL3a gb|AAF87034.1|AC006535_12 T24P13.25 [Arabidopsis thaliana] gb|AAD14503.1| Highly similar to cullin 3 [Arabidopsis thaliana] emb|CAC87120.1| cullin 3a [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene9990 biogeco3 v1.0 1310
• AutoFact: TIR1/AFB auxin receptor protein PintaTIR1 n=1 Tax=Pinus taeda RepID=C9EHS7_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaTIR1; Pinus taeda (Loblolly pine). 0.0
• Blast2go: transport inhibitor response 1 0.0
C-terminus
biog3_v1.0_unigene10190 biogeco3 v1.0 429
• AutoFact: cullin 3 [Arabidopsis thaliana] sp|Q9ZVH4.1|CUL3A_ARATH RecName: Full=Cullin-3A; Short=AtCUL3a gb|AAF87034.1|AC006535_12 T24P13.25 [Arabidopsis thaliana] gb|AAD14503.1| Highly similar to cullin 3 [Arabidopsis thaliana] emb|CAC87120.1| cullin 3a [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene10317 biogeco3 v1.0 845
• AutoFact: Coronatine-insensitive protein, putative n=1 Tax=Ricinus communis RepID=B9SWQ0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coronitine insensitive 1 0.0
Internal
biog3_v1.0_unigene10513 biogeco3 v1.0 881
• AutoFact: cullin 3 [Arabidopsis thaliana] sp|Q9ZVH4.1|CUL3A_ARATH RecName: Full=Cullin-3A; Short=AtCUL3a gb|AAF87034.1|AC006535_12 T24P13.25 [Arabidopsis thaliana] gb|AAD14503.1| Highly similar to cullin 3 [Arabidopsis thaliana] emb|CAC87120.1| cullin 3a [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cullin 3 0.0
Internal
biog3_v1.0_unigene10725 biogeco3 v1.0 742
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RDT2_RICCO 0.0
• FL-Next: Isoform 3 of SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 0.0
• Blast2go: skp1-like protein 21-like 0.0
N-terminus
biog3_v1.0_unigene13987 biogeco3 v1.0 273
• AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adagio protein 1 0.0
Internal
biog3_v1.0_unigene14209 biogeco3 v1.0 285
• AutoFact: ZEITLUPE n=1 Tax=Mesembryanthemum crystallinum RepID=Q6UEI5_MESCR 0.0
• FL-Next: sp=Adagio protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: adagio protein 1 0.0
Internal
biog3_v1.0_unigene14525 biogeco3 v1.0 392
• AutoFact: F-box/LRR-repeat protein 17 [Arabidopsis thaliana] sp|Q8W104.1|FBL17_ARATH RecName: Full=F-box/LRR-repeat protein 17; AltName: Full=F-box-like protein 17 gb|AAL58916.1|AF462827_1 AT3g54650/T5N23_10 [Arabidopsis thaliana] gb|AAM98270.1| At3g54650/T5N23_10 0.0
• FL-Next: sp=F-box/LRR-repeat protein 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: f-box lrr-repeat protein 17-like 0.0
C-terminus
biog3_v1.0_unigene15373 biogeco3 v1.0 256
• AutoFact: F-box/leucine rich repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SRD2_RICCO 0.0
• Blast2go: f-box protein ore9 0.0
unknown
biog3_v1.0_unigene15576 biogeco3 v1.0 290
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RDT2_RICCO 0.0
• Blast2go: skp1-like protein 21-like 0.0
unknown
biog3_v1.0_unigene16265 biogeco3 v1.0 365
• AutoFact: TIR1/AFB auxin receptor protein PintaTIR1 n=1 Tax=Pinus taeda RepID=C9EHS7_PINTA 0.0
• FL-Next: tr=TIR1/AFB auxin receptor protein PintaTIR1; Pinus taeda (Loblolly pine). 0.0
• Blast2go: transport inhibitor response 1 0.0
Internal
biog3_v1.0_unigene16970 biogeco3 v1.0 368
• AutoFact: cullin 3 [Arabidopsis thaliana] sp|Q9ZVH4.1|CUL3A_ARATH RecName: Full=Cullin-3A; Short=AtCUL3a gb|AAF87034.1|AC006535_12 T24P13.25 [Arabidopsis thaliana] gb|AAD14503.1| Highly similar to cullin 3 [Arabidopsis thaliana] emb|CAC87120.1| cullin 3a [Arabidops 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cullin 3 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain